RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TRIM10Q9UDY6 481 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 MRPS18BQ9Y676 258 aaKnown RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 MN1Q10571 1320 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 LILRA5A6NI73 299 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 ZNF487B1APH4 448 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 F5H423 210 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 KIF1CO43896 1103 aaKnown RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 AKR1B10O60218 316 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 DLGAP3O95886 979 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 PYGBP11216 843 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 SLC2A4P14672 509 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 XRCC1P18887 633 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 F8A1P23610 371 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 PTPN3P26045 913 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 CD68P34810 354 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 SEPHS1P49903 392 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 SH3BP2P78314 561 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 INSCQ1MX18 579 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 TMEM26Q6ZUK4 368 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.32
TGFB3-204ENST00000556285 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 NFKBIL1Q9UBC1 381 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 TMEM184BQ9Y519 407 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
TGFB3-204ENST00000556285 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 POLR1CO15160 346 aaPredicted RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 KMOO15229 486 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 GPR39O43194 453 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 MTA2O94776 668 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 NDST3O95803 873 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 C9P02748 559 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 MAP4P27816 1152 aaKnown RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 CHRNA4P43681 627 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 CCR10P46092 362 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 DRG2P55039 364 aaKnown RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 FOXM1Q08050 763 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ADCY2Q08462 1091 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 CDC20Q12834 499 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 PRKD1Q15139 912 aaPredicted RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ATP13A5Q4VNC0 1218 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 C11orf96Q7Z7L8 435 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 LRRTM4Q86VH4 590 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 PLXDC1Q8IUK5 500 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 RSC1A1Q92681 617 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ELMO2Q96JJ3 720 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ADNPQ9H2P0 1102 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 GOLPH3Q9H4A6 298 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ZNF71Q9NQZ8 489 aaPredicted RBP13.07□□□□□ -0.32
TGFB3-204ENST00000556285 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
TGFB3-204ENST00000556285 A0A0A6YYK5 440 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-204ENST00000556285 K7EM74 188 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-204ENST00000556285 CAPN5O15484 640 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-204ENST00000556285 BUD23O43709 281 aaKnown RBP13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UGT1A9O60656 530 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UBXN7O94888 489 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 CDK14O94921 469 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 VIPP01282 170 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UGT1A6P19224 532 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 NR1D1P20393 614 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 COMTP21964 271 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UGT1A1P22309 533 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UGT1A4P22310 534 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 STAT5AP42229 794 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 CDKN2BP42772 138 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 PPP1CAP62136 330 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 ABHD18Q0P651 414 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 GPR18Q14330 331 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 C16orf46Q6P387 395 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 KDELC1Q6UW63 502 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 TRIM48Q8IWZ4 208 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 TTC30BQ8N4P2 665 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 KIAA1143Q96AT1 154 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-204ENST00000556285 TEKT5Q96M29 485 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 ZPBPQ9BS86 351 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 EPB41L1Q9H4G0 881 aa13.06□□□□□ -0.32
TGFB3-204ENST00000556285 UCK1Q9HA47 277 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms