RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 NMD3Q96D46 503 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 C17orf80Q9BSJ5 609 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 SYTL2Q9HCH5 934 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 PAPOLBQ9NRJ5 636 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZNF711Q9Y462 761 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 C1orf232A0A0U1RR37 186 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 PRAMEF1O95521 474 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 CLIC3O95833 236 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZNF26P17031 533 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 SLC26A3P40879 764 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ERVPABLB-1P60509 514 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 RHDQ02161 417 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 TGFBIQ15582 683 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 RFLNAQ6ZTI6 216 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 DHFR2Q86XF0 187 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 GPSM1Q86YR5 675 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 FNDC5Q8NAU1 212 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 ZNF483Q8TF39 744 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 MRPL9Q9BYD2 267 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 FAM8A1Q9UBU6 413 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SOCS2O14508 198 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SLC6A2P23975 617 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 GSTT1P30711 240 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 CTSOP43234 321 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 HSPA7P48741 367 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 IL2P60568 153 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 DEFB103AP81534 67 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 XIAPP98170 497 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 NCEH1Q6PIU2 408 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 TBC1D30Q9Y2I9 924 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 NDUFAF1Q9Y375 327 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 ARHGAP10A1A4S6 786 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 E2F3O00716 465 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 CKMP06732 381 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 CAPN1P07384 714 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 NFYCQ13952 458 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SAMD4BQ5PRF9 694 aaKnown RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 RALGPS2Q86X27 583 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 DLG3Q92796 817 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SOX17Q9H6I2 414 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 AFF4Q9UHB7 1163 aaKnown RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 LZTS1Q9Y250 596 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 CYBBP04839 570 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 PYGLP06737 847 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 C8BP07358 591 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 GNAO1P09471 354 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 DGKQP52824 942 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 PHKG1Q16816 387 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 C8orf82Q6P1X6 216 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 IL27RAQ6UWB1 636 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SERPINA9Q86WD7 417 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 LRRC58Q96CX6 371 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 MYO19Q96H55 970 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 BTBD9Q96Q07 612 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SPATA16Q9BXB7 569 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 ADGRE3Q9BY15 652 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SDR39U1Q9NRG7 319 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 FARSBQ9NSD9 589 aaKnown RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 MBD1Q9UIS9 605 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 GPR45Q9Y5Y3 372 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 SLC30A1Q9Y6M5 507 aa12.31□□□□□ -0.44
HMGN1-220ENST00000492280 GAPDHSO14556 408 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
HMGN1-220ENST00000492280 FGF4P08620 206 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 CD70P32970 193 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 TTPAP49638 278 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 CLCN7P51798 805 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 SELPLGQ14242 412 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 SLC30A9Q6PML9 568 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 BBS7Q8IWZ6 715 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 KIAA2013Q8IYS2 634 aa12.3□□□□□ -0.44
HMGN1-220ENST00000492280 ADCY4Q8NFM4 1077 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms