RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 POLR2EP19388 210 aaKnown RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 UQCRFS1P47985 274 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TOB1P50616 345 aaPredicted RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TNNC1P63316 161 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 FOXO1Q12778 655 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 EIF3IQ13347 325 aaKnown RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 CTBP1Q13363 440 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 MAN2A1Q16706 1144 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 HNRNPA1L2Q32P51 320 aaKnown RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TMEM119Q4V9L6 283 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 ARTNQ5T4W7 220 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TAF3Q5VWG9 929 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 BEND5Q7L4P6 421 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 RAB11FIP2Q7L804 512 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 DSG4Q86SJ6 1040 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TADA2BQ86TJ2 420 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 MOGAT3Q86VF5 341 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 DTX3Q8N9I9 347 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 STT3BQ8TCJ2 826 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 NOC3LQ8WTT2 800 aaKnown RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 HVCN1Q96D96 273 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 CNPPD1Q9BV87 410 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 STRA6Q9BX79 667 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 TRPS1Q9UHF7 1281 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 CYTH4Q9UIA0 394 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 RASAL2Q9UJF2 1139 aa6.09□□□□□ -1.43
KARSP1-201ENST00000451871 NOL7Q9UMY1 257 aaKnown RBP6.09□□□□□ -1.43
KARSP1-201ENST00000451871 ARHGEF17Q96PE2 2063 aaPredicted RBP6.09□□□□□ -1.44
KARSP1-201ENST00000451871 FN1P02751 2386 aaKnown RBP6.09□□□□□ -1.44
KARSP1-201ENST00000451871 PIP5K1BO14986 540 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 PHF2O75151 1096 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SEMA7AO75326 666 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 TBCAO75347 108 aaKnown RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 REC8O95072 547 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MATN4O95460 622 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 KRT7P08729 469 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 RALAP11233 206 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 HGFP14210 728 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 DRD3P35462 400 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 KCNJ5P48544 419 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 PSMD8P48556 350 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MLLT10P55197 1068 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ST8SIA6P61647 398 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MEF2AQ02078 507 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 DRAP1Q14919 205 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ME3Q16798 604 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MZT2BQ6NZ67 158 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 RNF44Q7L0R7 432 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 TRAPPC11Q7Z392 1133 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 B3GNT8Q7Z7M8 397 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SCD5Q86SK9 330 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 STK32CQ86UX6 486 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 LILRA3Q8N6C8 439 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ALG3Q92685 438 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 TMA16Q96EY4 203 aaKnown RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 WDR92Q96MX6 357 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CBWD1Q9BRT8 395 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SERHLQ9NQF3 203 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 RASSF1Q9NS23 344 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 NCKIPSDQ9NZQ3 722 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 EXOC7Q9UPT5 735 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ACTL7AQ9Y615 435 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CCDC168Q8NDH2 2452 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 TARSL2A2RTX5 802 aaKnown RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 HHLA1C9JL84 531 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 NTN3O00634 580 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MUSKO15146 869 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 THAP12O43422 761 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 VPS4BO75351 444 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 LUC7L3O95232 432 aaKnown RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ABHD16AO95870 558 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CD1AP06126 327 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 C8BP07358 591 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 GLI1P08151 1106 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SBK3P0C264 359 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CCDC130P13994 396 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 GNLYP22749 145 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 RRM1P23921 792 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 VIPR1P32241 457 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CD70P32970 193 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 HNRNPKP61978 463 aaKnown RBP eCLIP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 EFEMP1Q12805 493 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 MTM1Q13496 603 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SURF1Q15526 300 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 SETMARQ53H47 684 aaPredicted RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ZNF542PQ5EBM4 170 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 C1QL3Q5VWW1 255 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CAPRIN2Q6IMN6 1127 aaKnown RBP6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ZNF783Q6ZMS7 281 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ACOT1Q86TX2 421 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 LRRTM4Q86VH4 590 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 TRIM69Q86WT6 500 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ZFAND4Q86XD8 727 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 ZSWIM9Q86XI8 627 aa6.08□□□□□ -1.44
KARSP1-201ENST00000451871 CPOQ8IVL8 374 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms