RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ACVR1Q04771 509 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 CACNG1Q06432 222 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 LRP8Q14114 963 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 DHX34Q14147 1143 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 GPR33Q49SQ1 333 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 GUSBP11Q6P575 273 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 OGFOD3Q6PK18 319 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 TMEM220Q6QAJ8 160 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 CES3Q6UWW8 571 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 DET1Q7L5Y6 550 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 SERPINA9Q86WD7 417 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 TRAPPC5Q8IUR0 188 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 ZNF547Q8IVP9 402 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 PIANPQ8IYJ0 282 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 ARL10Q8N8L6 244 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 ZDHHC1Q8WTX9 485 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 SERPINB12Q96P63 405 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 ZCCHC2Q9C0B9 1178 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 XAB2Q9HCS7 855 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 SLC23A2Q9UGH3 650 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 PADI4Q9UM07 663 aa19.21■□□□□ 0.67
SEMA3B-206ENST00000439487 TRBV5-4A0A0C4DH59 114 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 OR2AG2A6NM03 316 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 NOBOXO60393 691 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 RFPL3O75679 317 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 DKK1O94907 266 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 GOT2P00505 430 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 ADRB1P08588 477 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 ZNF7P17097 686 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 FOXN2P32314 431 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 RPIAP49247 311 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 B4GALNT1Q00973 533 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 FOXC1Q12948 553 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 EFL1Q7Z2Z2 1120 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 PCGF5Q86SE9 256 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 GPR156Q8NFN8 814 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 OR6P1Q8NGX9 317 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 IFI44Q8TCB0 444 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 SGF29Q96ES7 293 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 COPS8Q99627 209 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 KIFC1Q9BW19 673 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 TRIM31Q9BZY9 425 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 KLC4Q9NSK0 619 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 TREX1Q9NSU2 369 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 EVA1BQ9NVM1 165 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 ZDHHC3Q9NYG2 299 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 NCKIPSDQ9NZQ3 722 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 SOX13Q9UN79 622 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 PCDHGA1Q9Y5H4 931 aa19.2■□□□□ 0.66
SEMA3B-206ENST00000439487 EME2A4GXA9 379 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 KIF2AO00139 706 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 EML2O95834 649 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 TOP3BO95985 862 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 TUBB4AP04350 444 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 ACRV1P26436 265 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 PRAMEP78395 509 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 INSCQ1MX18 579 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 CASC4Q6P4E1 433 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 AFTPHQ6ULP2 937 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 DHRS13Q6UX07 377 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 C11orf96Q7Z7L8 435 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 CHCHD4Q8N4Q1 142 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 OR4L1Q8NH43 312 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 PATE1Q8WXA2 126 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 PEX13Q92968 403 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 MFSD3Q96ES6 412 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 DCUN1D1Q96GG9 259 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 TIMM29Q9BSF4 260 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 MRM3Q9HC36 420 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 DNAJC16Q9Y2G8 782 aa19.19■□□□□ 0.66
SEMA3B-206ENST00000439487 ZFHX4Q86UP3 3567 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 TRBV23OR9-2A0A075B6M9 112 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 SDR42E2A6NKP2 422 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 RAD51CO43502 376 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 SNX2O60749 519 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 MAZP56270 477 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 CKAP4Q07065 602 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 DBN1Q16643 649 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 C14orf28Q4W4Y0 310 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 PERM1Q5SV97 790 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 FNBP1LQ5T0N5 605 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 ZNF572Q7Z3I7 529 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 HOOK3Q86VS8 718 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 NAGSQ8N159 534 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 AGGF1Q8N302 714 aaeCLIP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 BEND7Q8N7W2 519 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 ADAMTS14Q8WXS8 1223 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 TRIM56Q9BRZ2 755 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 OSGEPL1Q9H4B0 414 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 TBC1D29Q9UFV1 150 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 KIF26BQ2KJY2 2108 aa19.18■□□□□ 0.66
SEMA3B-206ENST00000439487 FAM187AA6NFU0 413 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 EFCAB8A8MWE9 144 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 SGTAO43765 313 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 POP7O75817 140 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 TRIM16O95361 564 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 RALBP11234 206 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 ATP1B2P14415 290 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 PBLDP30039 288 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 MAGEA3P43357 314 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms