RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TDP1Q9NUW8 608 aa18.34■□□□□ 0.53
STRADB-202ENST00000392249 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
STRADB-202ENST00000392249 SLCO3A1Q9UIG8 710 aa18.34■□□□□ 0.53
STRADB-202ENST00000392249 CRLS1Q9UJA2 301 aa18.34■□□□□ 0.53
STRADB-202ENST00000392249 SLC25A13Q9UJS0 675 aa18.34■□□□□ 0.53
STRADB-202ENST00000392249 TIMM22Q9Y584 194 aa18.34■□□□□ 0.53
STRADB-202ENST00000392249 PIKFYVEQ9Y2I7 2098 aa18.33■□□□□ 0.53
STRADB-202ENST00000392249 GRM6O15303 877 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 CRCPO75575 148 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 LINC00032P0C843 101 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 PTPN2P17706 415 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 ACRV1P26436 265 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 MSX2P35548 267 aaPredicted RBP18.33■□□□□ 0.52
STRADB-202ENST00000392249 SPAM1P38567 509 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 CCNHP51946 323 aaPredicted RBP18.33■□□□□ 0.52
STRADB-202ENST00000392249 NTHL1P78549 312 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 MAPRE2Q15555 327 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 MMEL1Q495T6 779 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 PAOXQ6QHF9 649 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 CRTC1Q6UUV9 634 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 ZNF483Q8TF39 744 aaPredicted RBP18.33■□□□□ 0.52
STRADB-202ENST00000392249 C1QTNF3Q9BXJ4 246 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 LINC00597Q9H2U6 94 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 GNPTGQ9UJJ9 305 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 NOTCH4Q99466 2003 aa18.33■□□□□ 0.52
STRADB-202ENST00000392249 ATP6V1C1P21283 382 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 RPS3P23396 243 aaKnown RBP eCLIP18.32■□□□□ 0.52
STRADB-202ENST00000392249 CEACAM7Q14002 265 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 GRB7Q14451 532 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 RBBP7Q16576 425 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 ZNF423Q2M1K9 1284 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 ARHGAP15Q53QZ3 475 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 LRRC66Q68CR7 880 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 DPY19L3Q6ZPD9 716 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 FRA10AC1Q70Z53 315 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 GPR26Q8NDV2 337 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 PLEKHG4BQ96PX9 1271 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 HGH1Q9BTY7 390 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 SUV39H2Q9H5I1 410 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 PRKAG2Q9UGJ0 569 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 ZNF225Q9UK10 706 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 LZTS1Q9Y250 596 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 TRBV5-4A0A0C4DH59 114 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 FBP2O00757 339 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 MAP3K7O43318 606 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 TRIM16O95361 564 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 UGT2B4P06133 528 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 CHRM1P11229 460 aaPredicted RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 PABPC1P11940 636 aaKnown RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 TYRP14679 529 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 EPCAMP16422 314 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 XRCC1P18887 633 aaPredicted RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 DDX6P26196 483 aaKnown RBP eCLIP18.32■□□□□ 0.52
STRADB-202ENST00000392249 IRS1P35568 1242 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 NME5P56597 212 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 STX1BP61266 288 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 STX5Q13190 355 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 KIF19Q2TAC6 998 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 LRRC73Q5JTD7 316 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 REP15Q6BDI9 236 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 GRAMD4Q6IC98 578 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 Q6ZVU0 165 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 SYVN1Q86TM6 617 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 KBTBD2Q8IY47 623 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 IRF7Q92985 503 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
STRADB-202ENST00000392249 TUBGCP3Q96CW5 907 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 SCRN2Q96FV2 425 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 CACNA2D2Q9NY47 1150 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 POLG2Q9UHN1 485 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 HCFC2Q9Y5Z7 792 aa18.32■□□□□ 0.52
STRADB-202ENST00000392249 E2F3O00716 465 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 SLC25A14O95258 325 aaPredicted RBP18.31■□□□□ 0.52
STRADB-202ENST00000392249 SNRPB2P08579 225 aaKnown RBP18.31■□□□□ 0.52
STRADB-202ENST00000392249 ZNF697Q5TEC3 545 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 RNF111Q6ZNA4 994 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 TPRG1Q6ZUI0 275 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 PHYKPLQ8IUZ5 450 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 DCBLD1Q8N8Z6 715 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 ECHDC3Q96DC8 303 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 PDLIM5Q96HC4 596 aaKnown RBP18.31■□□□□ 0.52
STRADB-202ENST00000392249 TUBGCP5Q96RT8 1024 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 LYSMD1Q96S90 227 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 TRIM24O15164 1050 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 ESRRBO95718 433 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 MLYCDO95822 493 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 ACADSP16219 412 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 C18orf21Q32NC0 220 aaPredicted RBP18.31■□□□□ 0.52
STRADB-202ENST00000392249 CARD16Q5EG05 197 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 SBSNQ6UWP8 590 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 USP45Q70EL2 814 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 CHST14Q8NCH0 376 aa18.31■□□□□ 0.52
STRADB-202ENST00000392249 C19orf43Q9BQ61 176 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms