RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SPESP1Q6UW49 350 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MBOAT1Q6ZNC8 495 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 COL26A1Q96A83 441 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 IMP4Q96G21 291 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 EBF3Q9H4W6 596 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 DOLKQ9UPQ8 538 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 NUP214P35658 2090 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 TAF1LQ8IZX4 1826 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ATG2BQ96BY7 2078 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ILVBLA1L0T0 632 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 I6L893 689 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 IFRD1O00458 451 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SMAD6O43541 496 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 LDB2O43679 373 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 HS6ST1O60243 411 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 STK16O75716 305 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SEC24AO95486 1093 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MTHFD1P11586 935 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ETV4P43268 484 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 KRT72Q14CN4 511 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MRPL10Q7Z7H8 261 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 THAP11Q96EK4 314 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 NRBF2Q96F24 287 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 ARMC7Q9H6L4 198 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 MTF2Q9Y483 593 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 SPO11Q9Y5K1 396 aa10.9□□□□□ -0.66
TOP3A-201ENST00000321105 TNPO3Q9Y5L0 923 aaKnown RBP10.9□□□□□ -0.66
TOP3A-201ENST00000321105 OTCP00480 354 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 LDLRP01130 860 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SPAM1P38567 509 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SCAPQ12770 1279 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TMPRSS11BQ86T26 416 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 PQLC1Q8N2U9 271 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 RHBGQ9H310 441 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 S100A14Q9HCY8 104 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 IMP3Q9NV31 184 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SLC31A1O15431 190 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 KCNA5P22460 613 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SLC6A4P31645 630 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 ATP6V1E1P36543 226 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 CCT8P50990 548 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 KIAA1324Q6UXG2 1013 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TRIM48Q8IWZ4 208 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 UMODL1-AS1Q8N2C9 162 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 ZNF555Q8NEP9 628 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 FEM1AQ9BSK4 669 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 LINC00597Q9H2U6 94 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 MMADHCQ9H3L0 296 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TRAFD1O14545 582 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 GBAP04062 536 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SOD2P04179 222 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 CYP2A6P11509 494 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 HOXB8P17481 243 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 CACNG1Q06432 222 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 MBTPS1Q14703 1052 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TAF1AQ15573 450 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 PSRC1Q6PGN9 363 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SLC30A9Q6PML9 568 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 RANBP10Q6VN20 620 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 RTKNQ9BST9 563 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 DUS2Q9NX74 493 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 E7ENX8 843 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TRIM38O00635 465 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TRIM24O15164 1050 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 GRM6O15303 877 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 EIF2S1P05198 315 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TYRP14679 529 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 PSMD8P48556 350 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 FOLH1Q04609 750 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 C18orf21Q32NC0 220 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 FAM219BQ5XKK7 198 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 LRRC66Q68CR7 880 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 GRAMD4Q6IC98 578 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TSPAN33Q86UF1 283 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 RAVER1Q8IY67 606 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 UTP15Q8TED0 518 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 LRTOMTQ8WZ04 291 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TMEM74Q96NL1 305 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 TSGA13Q96PP4 275 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 PANX1Q96RD7 426 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 AARSD1Q9BTE6 412 aaKnown RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 MFSD1Q9H3U5 465 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 DNAJC28Q9NX36 388 aa10.89□□□□□ -0.67
TOP3A-201ENST00000321105 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-201ENST00000321105 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 T-ENOLP0DO92 83 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 ITGAXP20702 1163 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 CRATP43155 626 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 STC1P52823 247 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms