RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LMNAP02545 664 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 PRDX3P30048 256 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 HMGCLP35914 325 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 HERVK_113P63132 956 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 LSAMPQ13449 338 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 TBCCQ15814 346 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 C1orf146Q5VVC0 180 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 TMEM215Q68D42 235 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 C22orf39Q6P5X5 142 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 GK5Q6ZS86 529 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 VOPP1Q96AW1 172 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 RCN3Q96D15 328 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 CMTM5Q96DZ9 223 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 ZFYVE19Q96K21 471 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 ERVK-6Q9BXR3 956 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 MAGEE1Q9HCI5 957 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 MAFFQ9ULX9 164 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 TMCO1Q9UM00 188 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 TIMM22Q9Y584 194 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 F8W8V4 182 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 TM7SF2O76062 418 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 HK3P52790 923 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 MYLK3Q32MK0 819 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 ADGRD2Q7Z7M1 963 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 HPS6Q86YV9 775 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 SLC22A9Q8IVM8 553 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 FBXO39Q8N4B4 442 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 FUBP1Q96AE4 644 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 NPAS2Q99743 824 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 VTI1BQ9UEU0 232 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 SORCS3Q9UPU3 1222 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 OAS3Q9Y6K5 1087 aaKnown RBP13.45□□□□□ -0.26
VMP1-201ENST00000262291 STX16-NPEPL1H3BU86 382 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CDK14O94921 469 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 TSPAN12O95859 305 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 VIPR2P41587 438 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CACNG1Q06432 222 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 LRRC36Q1X8D7 754 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 LRRC66Q68CR7 880 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CYHR1Q6ZMK1 362 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 SPATA24Q86W54 205 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 DNAJC5GQ8N7S2 189 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 GPR26Q8NDV2 337 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 IRF7Q92985 503 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 KIAA1191Q96A73 305 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CCDC126Q96EE4 140 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 EML4Q9HC35 981 aaKnown RBP13.44□□□□□ -0.26
VMP1-201ENST00000262291 HTRA2O43464 458 aaPredicted RBP13.44□□□□□ -0.26
VMP1-201ENST00000262291 CA3P07451 260 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 PABPC1P11940 636 aaKnown RBP13.44□□□□□ -0.26
VMP1-201ENST00000262291 SERPINA4P29622 427 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 PPARGP37231 505 aaPredicted RBP13.44□□□□□ -0.26
VMP1-201ENST00000262291 ARL1P40616 181 aaPredicted RBP13.44□□□□□ -0.26
VMP1-201ENST00000262291 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
VMP1-201ENST00000262291 DNAL1Q4LDG9 190 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 ARHGAP15Q53QZ3 475 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CRTC1Q6UUV9 634 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 OR9I1Q8NGQ6 314 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CDK15Q96Q40 435 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 TCF12Q99081 682 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 RMI1Q9H9A7 625 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 HACD3Q9P035 362 aa13.44□□□□□ -0.26
VMP1-201ENST00000262291 TTC34A8MYJ7 566 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 MAGEB3O15480 346 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 GUCA1CO95843 209 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 ENO3P13929 434 aaPredicted RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 LHCGRP22888 699 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 PKNOX1P55347 436 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 IL2P60568 153 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 SNRPD1P62314 119 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 CREB5Q02930 508 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 CDKN3Q16667 212 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 MPP7Q5T2T1 576 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 DET1Q7L5Y6 550 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 DDIASQ8IXT1 998 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 STAG3L4Q8TBR4 150 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 DERL2Q9GZP9 239 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 TFB2MQ9H5Q4 396 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 SPHK2Q9NRA0 654 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 CD274Q9NZQ7 290 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 EIF2B4Q9UI10 523 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 CRLS1Q9UJA2 301 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 IRAK3Q9Y616 596 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ALPK3Q96L96 1907 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms