RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 SOS1Q07889 1333 aaPredicted RBP8.36□□□□□ -1.07
NKRF-204ENST00000542113 CCT4P50991 539 aaKnown RBP8.36□□□□□ -1.07
NKRF-204ENST00000542113 TTC21AQ8NDW8 1320 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 EIF4A2Q14240 407 aaKnown RBP8.36□□□□□ -1.07
NKRF-204ENST00000542113 SULT6B1Q6IMI4 303 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 FBLN1P23142 703 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 KLHL40Q2TBA0 621 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 CEP85Q6P2H3 762 aa8.36□□□□□ -1.07
NKRF-204ENST00000542113 RTF1Q92541 710 aaKnown RBP8.36□□□□□ -1.07
NKRF-204ENST00000542113 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 TMEM2Q9UHN6 1383 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 GSPT1P15170 499 aaKnown RBP8.35□□□□□ -1.07
NKRF-204ENST00000542113 ARXQ96QS3 562 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 USP6P35125 1406 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 TOPAZ1Q8N9V7 1692 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 RGS12O14924 1447 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 MCM2P49736 904 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
NKRF-204ENST00000542113 MSH6P52701 1360 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 NALCNQ8IZF0 1738 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 FAM83GA6ND36 823 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
NKRF-204ENST00000542113 MCCP23508 829 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 ZRANB1Q9UGI0 708 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 ERC2O15083 957 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 CCDC173Q0VFZ6 552 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 STK31Q9BXU1 1019 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 OSBPL3Q9H4L5 887 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 RRAGDQ9NQL2 400 aaPredicted RBP8.34□□□□□ -1.07
NKRF-204ENST00000542113 PLEKHG1Q9ULL1 1385 aa8.34□□□□□ -1.07
NKRF-204ENST00000542113 CHMP4AQ9BY43 222 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
NKRF-204ENST00000542113 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
NKRF-204ENST00000542113 FLT4P35916 1363 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 ACEP12821 1306 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 SBNO1A3KN83 1393 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 BAG4O95429 457 aaKnown RBP8.33□□□□□ -1.08
NKRF-204ENST00000542113 GNAI3P08754 354 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 MLECQ14165 292 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 DCTN1Q14203 1278 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 PANK2Q9BZ23 570 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 CRB1P82279 1406 aa8.33□□□□□ -1.08
NKRF-204ENST00000542113 ROBO2Q9HCK4 1378 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 EPB41L2O43491 1005 aaKnown RBP8.32□□□□□ -1.08
NKRF-204ENST00000542113 GNAI2P04899 355 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 SDSP20132 328 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 BABAM1Q9NWV8 329 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 TSPYL4Q9UJ04 414 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 ESPNB1AK53 854 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
NKRF-204ENST00000542113 SSFA2P28290 1259 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 SRCIN1Q9C0H9 1055 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 KDRP35968 1356 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 SSH2Q76I76 1423 aa8.32□□□□□ -1.08
NKRF-204ENST00000542113 SLC4A2P04920 1241 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 UBR1Q8IWV7 1749 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 ADAMTS13Q76LX8 1427 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 MCM10Q7L590 875 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 MEIS3Q99687 375 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 TSPOAP1O95153 1857 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 PTPRUQ92729 1446 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 NASPP49321 788 aaPredicted RBP8.31□□□□□ -1.08
NKRF-204ENST00000542113 ZNF445P59923 1031 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 ANAPC15P60006 121 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 RBM42Q9BTD8 480 aaKnown RBP8.31□□□□□ -1.08
NKRF-204ENST00000542113 FOXD4L1Q9NU39 408 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 EID1Q9Y6B2 187 aa8.31□□□□□ -1.08
NKRF-204ENST00000542113 PXDNLA1KZ92 1463 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 CYP2E1P05181 493 aaPredicted RBP8.3□□□□□ -1.08
NKRF-204ENST00000542113 AOX1Q06278 1338 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 MBD3O95983 291 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 PDE1AP54750 535 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 NAP1L5Q96NT1 182 aaPredicted RBP8.3□□□□□ -1.08
NKRF-204ENST00000542113 LRRCC1Q9C099 1032 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 NCKAP5LQ9HCH0 1330 aa8.3□□□□□ -1.08
NKRF-204ENST00000542113 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 HS1BP3Q53T59 392 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 PPP1R9BQ96SB3 815 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 AMPHP49418 695 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 PLPPR3Q6T4P5 718 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
NKRF-204ENST00000542113 DIP2AQ14689 1571 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 ANKARQ7Z5J8 1434 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 MTHFSDQ2M296 383 aaKnown RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 KRT24Q2M2I5 525 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms