RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 FBLN1P23142 703 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
GGA3-201ENST00000537686 PSMA5P28066 241 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
GGA3-201ENST00000537686 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 RABEP1Q15276 862 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
GGA3-201ENST00000537686 CCDC73Q6ZRK6 1079 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 TBC1D2BQ9UPU7 963 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
GGA3-201ENST00000537686 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
GGA3-201ENST00000537686 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 KCNH5Q8NCM2 988 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 LTKP29376 864 aa12.11□□□□□ -0.47
GGA3-201ENST00000537686 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
GGA3-201ENST00000537686 CNNM1Q9NRU3 951 aa12.1□□□□□ -0.47
GGA3-201ENST00000537686 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
GGA3-201ENST00000537686 RPAP2Q8IXW5 612 aaPredicted RBP12.1□□□□□ -0.47
GGA3-201ENST00000537686 PHF8Q9UPP1 1060 aa12.1□□□□□ -0.47
GGA3-201ENST00000537686 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
GGA3-201ENST00000537686 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
GGA3-201ENST00000537686 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 KDM5CP41229 1560 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
GGA3-201ENST00000537686 MCM2P49736 904 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 PDE4CQ08493 712 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
GGA3-201ENST00000537686 ANKRD36BQ8N2N9 1353 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 HIP1O00291 1037 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 MAP4K4O95819 1239 aaPredicted RBP12.08□□□□□ -0.48
GGA3-201ENST00000537686 NOC3LQ8WTT2 800 aaKnown RBP12.08□□□□□ -0.48
GGA3-201ENST00000537686 TRAK2O60296 914 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
GGA3-201ENST00000537686 SASS6Q6UVJ0 657 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 ATP2B1P20020 1258 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 KIDINS220Q9ULH0 1771 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
GGA3-201ENST00000537686 KDM4AO75164 1064 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 TPM1P09493 284 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 PDCP20941 246 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 ACEP12821 1306 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
GGA3-201ENST00000537686 ABCC11Q96J66 1382 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 AACSQ86V21 672 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 E9PCH4 1651 aa12.07□□□□□ -0.48
GGA3-201ENST00000537686 FIBPO43427 364 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 KCNA6P17658 529 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 CCDC85AQ96PX6 553 aaPredicted RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 CCAR2Q8N163 923 aaKnown RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 TBX22Q9Y458 520 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 MYOM2P54296 1465 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 F6X3S4 739 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 SART3Q15020 963 aaKnown RBP12.06□□□□□ -0.48
GGA3-201ENST00000537686 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
GGA3-201ENST00000537686 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 CCDC47Q96A33 483 aaKnown RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 ZNF592Q92610 1267 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 CEP89Q96ST8 783 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
GGA3-201ENST00000537686 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
GGA3-201ENST00000537686 TTC39AQ5SRH9 613 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 MBD3O95983 291 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
GGA3-201ENST00000537686 MPRIPQ6WCQ1 1025 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 HSPA2P54652 639 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
GGA3-201ENST00000537686 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
GGA3-201ENST00000537686 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
GGA3-201ENST00000537686 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms