RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 PMFBP1Q8TBY8 1022 aa9.96□□□□□ -0.82
FNTA-213ENST00000533559 PRAM1Q96QH2 718 aa9.96□□□□□ -0.82
FNTA-213ENST00000533559 BACH2Q9BYV9 841 aa9.96□□□□□ -0.82
FNTA-213ENST00000533559 CHMP4BQ9H444 224 aaKnown RBP9.96□□□□□ -0.82
FNTA-213ENST00000533559 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
FNTA-213ENST00000533559 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
FNTA-213ENST00000533559 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
FNTA-213ENST00000533559 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
FNTA-213ENST00000533559 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
FNTA-213ENST00000533559 A0A1W2PP64 1363 aa9.95□□□□□ -0.82
FNTA-213ENST00000533559 ANKRD26Q9UPS8 1709 aa9.94□□□□□ -0.82
FNTA-213ENST00000533559 DISP2A7MBM2 1401 aa9.94□□□□□ -0.82
FNTA-213ENST00000533559 ZNF428Q96B54 188 aa9.94□□□□□ -0.82
FNTA-213ENST00000533559 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
FNTA-213ENST00000533559 FAM83GA6ND36 823 aa9.93□□□□□ -0.82
FNTA-213ENST00000533559 DIAPH1O60610 1272 aaKnown RBP9.93□□□□□ -0.82
FNTA-213ENST00000533559 TNNT2P45379 298 aaPredicted RBP9.93□□□□□ -0.82
FNTA-213ENST00000533559 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
FNTA-213ENST00000533559 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
FNTA-213ENST00000533559 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
FNTA-213ENST00000533559 FAM182BQ5T319 152 aa9.93□□□□□ -0.82
FNTA-213ENST00000533559 CDK19Q9BWU1 502 aa9.93□□□□□ -0.82
FNTA-213ENST00000533559 TOPAZ1Q8N9V7 1692 aa9.93□□□□□ -0.82
FNTA-213ENST00000533559 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
FNTA-213ENST00000533559 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
FNTA-213ENST00000533559 FCHSD2O94868 740 aa9.92□□□□□ -0.82
FNTA-213ENST00000533559 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
FNTA-213ENST00000533559 CLUAP1Q96AJ1 413 aa9.92□□□□□ -0.82
FNTA-213ENST00000533559 PPM1GO15355 546 aaPredicted RBP9.91□□□□□ -0.82
FNTA-213ENST00000533559 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
FNTA-213ENST00000533559 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
FNTA-213ENST00000533559 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
FNTA-213ENST00000533559 USP35Q9P2H5 1018 aa9.91□□□□□ -0.82
FNTA-213ENST00000533559 FBXO3Q9UK99 471 aa9.91□□□□□ -0.82
FNTA-213ENST00000533559 NRKQ7Z2Y5 1582 aa9.91□□□□□ -0.82
FNTA-213ENST00000533559 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.82
FNTA-213ENST00000533559 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
FNTA-213ENST00000533559 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
FNTA-213ENST00000533559 U2SURPO15042 1029 aaKnown RBP9.9□□□□□ -0.82
FNTA-213ENST00000533559 FYB1O15117 783 aa9.9□□□□□ -0.82
FNTA-213ENST00000533559 ZKSCAN2Q63HK3 967 aa9.9□□□□□ -0.82
FNTA-213ENST00000533559 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
FNTA-213ENST00000533559 RWDD1Q9H446 243 aaPredicted RBP9.9□□□□□ -0.82
FNTA-213ENST00000533559 KIF16BQ96L93 1317 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 PRR36Q9H6K5 1346 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
FNTA-213ENST00000533559 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 C20orf194Q5TEA3 1177 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 FTSJ3Q8IY81 847 aaKnown RBP9.89□□□□□ -0.83
FNTA-213ENST00000533559 UPF2Q9HAU5 1272 aaKnown RBP9.89□□□□□ -0.83
FNTA-213ENST00000533559 KIF20BQ96Q89 1820 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 WNK3Q9BYP7 1800 aa9.89□□□□□ -0.83
FNTA-213ENST00000533559 PARP4Q9UKK3 1724 aaKnown RBP9.88□□□□□ -0.83
FNTA-213ENST00000533559 LMO7Q8WWI1 1683 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 EIF5BO60841 1220 aaKnown RBP9.88□□□□□ -0.83
FNTA-213ENST00000533559 BCAR3O75815 825 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 TMPOP42166 694 aaKnown RBP9.88□□□□□ -0.83
FNTA-213ENST00000533559 EZH2Q15910 746 aaKnown RBP9.88□□□□□ -0.83
FNTA-213ENST00000533559 GGNBP2Q9H3C7 697 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
FNTA-213ENST00000533559 PRDM11Q9NQV5 511 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 AATKQ6ZMQ8 1374 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
FNTA-213ENST00000533559 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 FRAT1Q92837 279 aaPredicted RBP9.87□□□□□ -0.83
FNTA-213ENST00000533559 COG3Q96JB2 828 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 RGPD3A6NKT7 1758 aaPredicted RBP9.87□□□□□ -0.83
FNTA-213ENST00000533559 RGPD4Q7Z3J3 1758 aa9.87□□□□□ -0.83
FNTA-213ENST00000533559 SBF2Q86WG5 1849 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 SPATA31A1Q5TZJ5 1347 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
FNTA-213ENST00000533559 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 LRRC37A3O60309 1634 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
FNTA-213ENST00000533559 TRIM37O94972 964 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 NPM2Q86SE8 214 aaKnown RBP9.86□□□□□ -0.83
FNTA-213ENST00000533559 DZIP1LQ8IYY4 767 aaKnown RBP9.86□□□□□ -0.83
FNTA-213ENST00000533559 PLEKHF1Q96S99 279 aa9.86□□□□□ -0.83
FNTA-213ENST00000533559 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
FNTA-213ENST00000533559 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 RIPK4P57078 832 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 MVPQ14764 893 aaKnown RBP9.85□□□□□ -0.83
FNTA-213ENST00000533559 CHRNA2Q15822 529 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
FNTA-213ENST00000533559 STRN4Q9NRL3 753 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 RRP7AQ9Y3A4 280 aaKnown RBP9.85□□□□□ -0.83
FNTA-213ENST00000533559 AKAP12Q02952 1782 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
FNTA-213ENST00000533559 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 CASZ1Q86V15 1759 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 PRKAR2AP13861 404 aaKnown RBP9.84□□□□□ -0.83
FNTA-213ENST00000533559 GNAI1P63096 354 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 BECN1Q14457 450 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 SMC4Q9NTJ3 1288 aa9.84□□□□□ -0.83
FNTA-213ENST00000533559 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms