RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 HMOX1P09601 288 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 FBLN1P23142 703 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 SULT6B1Q6IMI4 303 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 CFAP44Q96MT7 982 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 CRBNQ96SW2 442 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 CHMP4BQ9H444 224 aaKnown RBP10.21□□□□□ -0.77
VMA21-203ENST00000477649 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
VMA21-203ENST00000477649 IGSF1Q8N6C5 1336 aa10.21□□□□□ -0.78
VMA21-203ENST00000477649 KIF16BQ96L93 1317 aa10.21□□□□□ -0.78
VMA21-203ENST00000477649 C1orf167Q5SNV9 1468 aa10.21□□□□□ -0.78
VMA21-203ENST00000477649 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.78
VMA21-203ENST00000477649 RGPD8O14715 1765 aaPredicted RBP10.21□□□□□ -0.78
VMA21-203ENST00000477649 ATMINO43313 823 aaPredicted RBP10.2□□□□□ -0.78
VMA21-203ENST00000477649 ZNF853P0CG23 659 aa10.2□□□□□ -0.78
VMA21-203ENST00000477649 TMEM94Q12767 1356 aa10.2□□□□□ -0.78
VMA21-203ENST00000477649 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
VMA21-203ENST00000477649 IP6K1Q92551 441 aa10.2□□□□□ -0.78
VMA21-203ENST00000477649 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
VMA21-203ENST00000477649 PHRF1Q9P1Y6 1649 aaKnown RBP10.19□□□□□ -0.78
VMA21-203ENST00000477649 MSH6P52701 1360 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 PLIN1O60240 522 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 BCAR3O75815 825 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 HOXC9P31274 260 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 BABAM1Q9NWV8 329 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 PEAK1Q9H792 1746 aa10.19□□□□□ -0.78
VMA21-203ENST00000477649 SLIT3O75094 1523 aa10.18□□□□□ -0.78
VMA21-203ENST00000477649 USP19O94966 1318 aa10.18□□□□□ -0.78
VMA21-203ENST00000477649 SOS1Q07889 1333 aaPredicted RBP10.18□□□□□ -0.78
VMA21-203ENST00000477649 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
VMA21-203ENST00000477649 TCERG1O14776 1098 aaKnown RBP10.18□□□□□ -0.78
VMA21-203ENST00000477649 EXOSC9Q06265 439 aaKnown RBP10.18□□□□□ -0.78
VMA21-203ENST00000477649 ILDR2Q71H61 639 aa10.18□□□□□ -0.78
VMA21-203ENST00000477649 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
VMA21-203ENST00000477649 NFAT5O94916 1531 aa10.17□□□□□ -0.78
VMA21-203ENST00000477649 KRT28Q7Z3Y7 464 aa10.17□□□□□ -0.78
VMA21-203ENST00000477649 RTF1Q92541 710 aaKnown RBP10.17□□□□□ -0.78
VMA21-203ENST00000477649 EYA1Q99502 592 aa10.17□□□□□ -0.78
VMA21-203ENST00000477649 CHMP4AQ9BY43 222 aa10.17□□□□□ -0.78
VMA21-203ENST00000477649 SMC4Q9NTJ3 1288 aa10.17□□□□□ -0.78
VMA21-203ENST00000477649 KIAA0232Q92628 1395 aa10.16□□□□□ -0.78
VMA21-203ENST00000477649 FOXO3O43524 673 aa10.16□□□□□ -0.78
VMA21-203ENST00000477649 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
VMA21-203ENST00000477649 ABCC6O95255 1503 aa10.16□□□□□ -0.78
VMA21-203ENST00000477649 MARF1Q9Y4F3 1742 aaKnown RBP10.16□□□□□ -0.78
VMA21-203ENST00000477649 CHL1O00533 1208 aa10.15□□□□□ -0.78
VMA21-203ENST00000477649 GCP02774 474 aa10.15□□□□□ -0.78
VMA21-203ENST00000477649 C20orf194Q5TEA3 1177 aa10.15□□□□□ -0.78
VMA21-203ENST00000477649 ARHGEF25Q86VW2 580 aa10.15□□□□□ -0.78
VMA21-203ENST00000477649 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.78
VMA21-203ENST00000477649 DZIP1LQ8IYY4 767 aaKnown RBP10.15□□□□□ -0.78
VMA21-203ENST00000477649 TSR2Q969E8 191 aaKnown RBP10.15□□□□□ -0.78
VMA21-203ENST00000477649 SOX12O15370 315 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 AMOTQ4VCS5 1084 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 ATF7IPQ6VMQ6 1270 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 AEBP1Q8IUX7 1158 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 FRAT1Q92837 279 aaPredicted RBP10.14□□□□□ -0.79
VMA21-203ENST00000477649 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 DDX19BQ9UMR2 479 aa10.14□□□□□ -0.79
VMA21-203ENST00000477649 TRPM3Q9HCF6 1732 aaPredicted RBP10.13□□□□□ -0.79
VMA21-203ENST00000477649 KDM2BQ8NHM5 1336 aa10.13□□□□□ -0.79
VMA21-203ENST00000477649 VAMP4O75379 141 aa10.13□□□□□ -0.79
VMA21-203ENST00000477649 MVPQ14764 893 aaKnown RBP10.13□□□□□ -0.79
VMA21-203ENST00000477649 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
VMA21-203ENST00000477649 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
VMA21-203ENST00000477649 MBIPQ9NS73 344 aa10.13□□□□□ -0.79
VMA21-203ENST00000477649 NCAPD2Q15021 1401 aa10.13□□□□□ -0.79
VMA21-203ENST00000477649 STRCQ7RTU9 1775 aa10.12□□□□□ -0.79
VMA21-203ENST00000477649 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
VMA21-203ENST00000477649 MTHFSDQ2M296 383 aaKnown RBP10.12□□□□□ -0.79
VMA21-203ENST00000477649 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
VMA21-203ENST00000477649 NUTM2GQ5VZR2 741 aa10.12□□□□□ -0.79
VMA21-203ENST00000477649 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
VMA21-203ENST00000477649 LAS1LQ9Y4W2 734 aaKnown RBP10.12□□□□□ -0.79
VMA21-203ENST00000477649 CRB1P82279 1406 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 MS4A3Q96HJ5 214 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 RWDD1Q9H446 243 aaPredicted RBP10.11□□□□□ -0.79
VMA21-203ENST00000477649 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 MAP3K5Q99683 1374 aa10.11□□□□□ -0.79
VMA21-203ENST00000477649 OVOS2A0A0G2JMS6 1433 aa10.1□□□□□ -0.79
VMA21-203ENST00000477649 ALS2Q96Q42 1657 aa10.1□□□□□ -0.79
VMA21-203ENST00000477649 TRIM27P14373 513 aa10.1□□□□□ -0.79
VMA21-203ENST00000477649 PLEKHO1Q53GL0 409 aaPredicted RBP10.1□□□□□ -0.79
VMA21-203ENST00000477649 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
VMA21-203ENST00000477649 PANK1Q8TE04 598 aa10.1□□□□□ -0.79
VMA21-203ENST00000477649 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
VMA21-203ENST00000477649 CPDO75976 1380 aa10.1□□□□□ -0.79
VMA21-203ENST00000477649 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
VMA21-203ENST00000477649 PTPRCP08575 1304 aa10.09□□□□□ -0.79
VMA21-203ENST00000477649 SPATA31A3Q5VYP0 1347 aa10.09□□□□□ -0.79
VMA21-203ENST00000477649 STRCP1A6NGW2 1772 aa10.09□□□□□ -0.79
VMA21-203ENST00000477649 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
VMA21-203ENST00000477649 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
VMA21-203ENST00000477649 DLG5Q8TDM6 1919 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms