RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KIF2CQ99661 725 aa17.91■□□□□ 0.46
MSH5-206ENST00000423982 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
MSH5-206ENST00000423982 KIF20BQ96Q89 1820 aa17.89■□□□□ 0.46
MSH5-206ENST00000423982 ESPNB1AK53 854 aa17.89■□□□□ 0.45
MSH5-206ENST00000423982 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
MSH5-206ENST00000423982 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
MSH5-206ENST00000423982 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
MSH5-206ENST00000423982 MST1RQ04912 1400 aa17.88■□□□□ 0.45
MSH5-206ENST00000423982 HSP90AA1P07900 732 aaKnown RBP17.87■□□□□ 0.45
MSH5-206ENST00000423982 SNX21Q969T3 373 aa17.87■□□□□ 0.45
MSH5-206ENST00000423982 RAB3GAP1Q15042 981 aa17.86■□□□□ 0.45
MSH5-206ENST00000423982 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
MSH5-206ENST00000423982 SSFA2P28290 1259 aa17.85■□□□□ 0.45
MSH5-206ENST00000423982 KRT28Q7Z3Y7 464 aa17.85■□□□□ 0.45
MSH5-206ENST00000423982 XIRP1Q702N8 1843 aaKnown RBP17.85■□□□□ 0.45
MSH5-206ENST00000423982 AK9Q5TCS8 1911 aa17.85■□□□□ 0.45
MSH5-206ENST00000423982 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
MSH5-206ENST00000423982 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
MSH5-206ENST00000423982 NRKQ7Z2Y5 1582 aa17.84■□□□□ 0.45
MSH5-206ENST00000423982 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
MSH5-206ENST00000423982 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
MSH5-206ENST00000423982 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
MSH5-206ENST00000423982 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
MSH5-206ENST00000423982 TRIM44Q96DX7 344 aaPredicted RBP17.83■□□□□ 0.45
MSH5-206ENST00000423982 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
MSH5-206ENST00000423982 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
MSH5-206ENST00000423982 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
MSH5-206ENST00000423982 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
MSH5-206ENST00000423982 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
MSH5-206ENST00000423982 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
MSH5-206ENST00000423982 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
MSH5-206ENST00000423982 HSP90AA2PQ14568 343 aaPredicted RBP17.82■□□□□ 0.44
MSH5-206ENST00000423982 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 ANKRD26Q9UPS8 1709 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 PIK3C2AO00443 1686 aa17.81■□□□□ 0.44
MSH5-206ENST00000423982 ZBTB7BO15156 539 aaPredicted RBP17.8■□□□□ 0.44
MSH5-206ENST00000423982 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
MSH5-206ENST00000423982 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
MSH5-206ENST00000423982 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
MSH5-206ENST00000423982 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
MSH5-206ENST00000423982 DCCP43146 1447 aa17.79■□□□□ 0.44
MSH5-206ENST00000423982 HMOX1P09601 288 aa17.79■□□□□ 0.44
MSH5-206ENST00000423982 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
MSH5-206ENST00000423982 MAP2P11137 1827 aaKnown RBP17.79■□□□□ 0.44
MSH5-206ENST00000423982 IL16Q14005 1332 aa17.79■□□□□ 0.44
MSH5-206ENST00000423982 MAP3K19Q56UN5 1328 aa17.79■□□□□ 0.44
MSH5-206ENST00000423982 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
MSH5-206ENST00000423982 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
MSH5-206ENST00000423982 PRKAR2BP31323 418 aa17.78■□□□□ 0.44
MSH5-206ENST00000423982 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
MSH5-206ENST00000423982 AMPHP49418 695 aa17.77■□□□□ 0.44
MSH5-206ENST00000423982 NPHP3Q7Z494 1330 aa17.76■□□□□ 0.43
MSH5-206ENST00000423982 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
MSH5-206ENST00000423982 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
MSH5-206ENST00000423982 ISY1Q9ULR0 285 aaKnown RBP17.76■□□□□ 0.43
MSH5-206ENST00000423982 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
MSH5-206ENST00000423982 PKP1Q13835 747 aa17.75■□□□□ 0.43
MSH5-206ENST00000423982 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
MSH5-206ENST00000423982 VAMP4O75379 141 aa17.75■□□□□ 0.43
MSH5-206ENST00000423982 ZC3H6P61129 1189 aaKnown RBP17.75■□□□□ 0.43
MSH5-206ENST00000423982 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
MSH5-206ENST00000423982 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
MSH5-206ENST00000423982 NASPP49321 788 aaPredicted RBP17.74■□□□□ 0.43
MSH5-206ENST00000423982 SKOR2Q2VWA4 1001 aaPredicted RBP17.74■□□□□ 0.43
MSH5-206ENST00000423982 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
MSH5-206ENST00000423982 CHAMP1Q96JM3 812 aa17.73■□□□□ 0.43
MSH5-206ENST00000423982 GCC1Q96CN9 775 aa17.73■□□□□ 0.43
MSH5-206ENST00000423982 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
MSH5-206ENST00000423982 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
MSH5-206ENST00000423982 NCLP19338 710 aaKnown RBP17.72■□□□□ 0.43
MSH5-206ENST00000423982 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
MSH5-206ENST00000423982 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
MSH5-206ENST00000423982 GCP02774 474 aa17.72■□□□□ 0.43
MSH5-206ENST00000423982 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
MSH5-206ENST00000423982 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
MSH5-206ENST00000423982 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.42
MSH5-206ENST00000423982 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 CDC45O75419 566 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 IL13P35225 146 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
MSH5-206ENST00000423982 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 MBIPQ9NS73 344 aa17.7■□□□□ 0.42
MSH5-206ENST00000423982 APBB1O00213 710 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 FCHSD2O94868 740 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 C8orf58Q8NAV2 365 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 KLHL40Q2TBA0 621 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 PLEKHM2Q8IWE5 1019 aa17.69■□□□□ 0.42
MSH5-206ENST00000423982 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms