RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 AXDND1Q5T1B0 1012 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 DDX23Q9BUQ8 820 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 DDX19BQ9UMR2 479 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 TAF12Q16514 161 aa12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 PLS1Q14651 629 aa12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 TMCO4Q5TGY1 634 aa12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 IDH1O75874 414 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
CACNA1C-216ENST00000399638 MNS1Q8NEH6 495 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 UQCRHP07919 91 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 SLF2Q8IX21 1173 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 CEP63Q96MT8 703 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 UBE2Q2Q8WVN8 375 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 RAPGEF3O95398 923 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 FILIP1LQ4L180 1135 aa12.91□□□□□ -0.34
CACNA1C-216ENST00000399638 FERMT2Q96AC1 680 aa12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
CACNA1C-216ENST00000399638 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.35
CACNA1C-216ENST00000399638 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.35
CACNA1C-216ENST00000399638 RUNDC1Q96C34 613 aa12.9□□□□□ -0.35
CACNA1C-216ENST00000399638 STIM1Q13586 685 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 MINDY4BA8MYZ0 360 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 MRE11P49959 708 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 SULT6B1Q6IMI4 303 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-216ENST00000399638 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 HSP90B2PQ58FF3 399 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
CACNA1C-216ENST00000399638 HIP1O00291 1037 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 STK3Q13188 491 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 BIRC2Q13490 618 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 LPXNO60711 386 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 EAPPQ56P03 285 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 OGFOD1Q8N543 542 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 AIDAQ96BJ3 306 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 FLIIQ13045 1269 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 ERLIN2O94905 339 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 GNAI3P08754 354 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 F8W031 263 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 TNNT1P13805 278 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
CACNA1C-216ENST00000399638 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 UQCRHLA0A096LP55 91 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 NAT10Q9H0A0 1025 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 LRPPRCP42704 1394 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 AKNAQ7Z591 1439 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 NOD1Q9Y239 953 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
CACNA1C-216ENST00000399638 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 GPTP24298 496 aa12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
CACNA1C-216ENST00000399638 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms