RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GAS2L2Q8NHY3 880 aa21.88■■□□□ 1.09
RTN4-204ENST00000357732 CPS1P31327 1500 aa21.87■■□□□ 1.09
RTN4-204ENST00000357732 UBE2Q2Q8WVN8 375 aa21.87■■□□□ 1.09
RTN4-204ENST00000357732 CWC22Q9HCG8 908 aaKnown RBP21.87■■□□□ 1.09
RTN4-204ENST00000357732 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
RTN4-204ENST00000357732 RGS12O14924 1447 aa21.86■■□□□ 1.09
RTN4-204ENST00000357732 CCDC173Q0VFZ6 552 aa21.85■■□□□ 1.09
RTN4-204ENST00000357732 USP26Q9BXU7 913 aa21.85■■□□□ 1.09
RTN4-204ENST00000357732 BAG4O95429 457 aaKnown RBP21.84■■□□□ 1.09
RTN4-204ENST00000357732 FAM83GA6ND36 823 aa21.84■■□□□ 1.09
RTN4-204ENST00000357732 GAS2L3Q86XJ1 694 aa21.84■■□□□ 1.09
RTN4-204ENST00000357732 SSFA2P28290 1259 aa21.83■■□□□ 1.09
RTN4-204ENST00000357732 RBM42Q9BTD8 480 aaKnown RBP21.83■■□□□ 1.09
RTN4-204ENST00000357732 CHL1O00533 1208 aa21.83■■□□□ 1.08
RTN4-204ENST00000357732 CYP2E1P05181 493 aaPredicted RBP21.83■■□□□ 1.08
RTN4-204ENST00000357732 PPP1R9BQ96SB3 815 aa21.83■■□□□ 1.08
RTN4-204ENST00000357732 ST18O60284 1047 aa21.82■■□□□ 1.08
RTN4-204ENST00000357732 REC8O95072 547 aa21.82■■□□□ 1.08
RTN4-204ENST00000357732 DCTN1Q14203 1278 aa21.82■■□□□ 1.08
RTN4-204ENST00000357732 CEP85Q6P2H3 762 aa21.82■■□□□ 1.08
RTN4-204ENST00000357732 ANP32BQ92688 251 aaKnown RBP21.82■■□□□ 1.08
RTN4-204ENST00000357732 RTL1A6NKG5 1358 aa21.81■■□□□ 1.08
RTN4-204ENST00000357732 ZNF445P59923 1031 aa21.81■■□□□ 1.08
RTN4-204ENST00000357732 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
RTN4-204ENST00000357732 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
RTN4-204ENST00000357732 NAP1L5Q96NT1 182 aaPredicted RBP21.8■■□□□ 1.08
RTN4-204ENST00000357732 PRR36Q9H6K5 1346 aa21.79■■□□□ 1.08
RTN4-204ENST00000357732 HMMRO75330 724 aa21.79■■□□□ 1.08
RTN4-204ENST00000357732 HDGFP51858 240 aaKnown RBP21.79■■□□□ 1.08
RTN4-204ENST00000357732 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
RTN4-204ENST00000357732 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
RTN4-204ENST00000357732 NASPP49321 788 aaPredicted RBP21.78■■□□□ 1.08
RTN4-204ENST00000357732 FOXD4L1Q9NU39 408 aa21.78■■□□□ 1.08
RTN4-204ENST00000357732 SDSP20132 328 aa21.77■■□□□ 1.08
RTN4-204ENST00000357732 MSH6P52701 1360 aa21.77■■□□□ 1.08
RTN4-204ENST00000357732 OVOS2A0A0J9YW53 1432 aa21.76■■□□□ 1.07
RTN4-204ENST00000357732 OVOS2Q6IE36 1432 aa21.76■■□□□ 1.07
RTN4-204ENST00000357732 AEBP1Q8IUX7 1158 aa21.76■■□□□ 1.07
RTN4-204ENST00000357732 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
RTN4-204ENST00000357732 TTC21BQ7Z4L5 1316 aa21.75■■□□□ 1.07
RTN4-204ENST00000357732 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
RTN4-204ENST00000357732 HS1BP3Q53T59 392 aa21.75■■□□□ 1.07
RTN4-204ENST00000357732 ESF1Q9H501 851 aaKnown RBP21.75■■□□□ 1.07
RTN4-204ENST00000357732 ARHGEF10O15013 1369 aa21.75■■□□□ 1.07
RTN4-204ENST00000357732 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
RTN4-204ENST00000357732 ERC2O15083 957 aa21.74■■□□□ 1.07
RTN4-204ENST00000357732 MCM2P49736 904 aa21.73■■□□□ 1.07
RTN4-204ENST00000357732 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
RTN4-204ENST00000357732 CRB1P82279 1406 aa21.73■■□□□ 1.07
RTN4-204ENST00000357732 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
RTN4-204ENST00000357732 CCT4P50991 539 aaKnown RBP21.73■■□□□ 1.07
RTN4-204ENST00000357732 LMBRD1Q9NUN5 540 aa21.73■■□□□ 1.07
RTN4-204ENST00000357732 C16orf71Q8IYS4 520 aaPredicted RBP21.72■■□□□ 1.07
RTN4-204ENST00000357732 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
RTN4-204ENST00000357732 KRT24Q2M2I5 525 aa21.71■■□□□ 1.07
RTN4-204ENST00000357732 ZSCAN30Q86W11 494 aa21.71■■□□□ 1.07
RTN4-204ENST00000357732 RRP9O43818 475 aaKnown RBP21.7■■□□□ 1.07
RTN4-204ENST00000357732 MCTP1Q6DN14 999 aa21.7■■□□□ 1.07
RTN4-204ENST00000357732 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
RTN4-204ENST00000357732 TNRQ92752 1358 aa21.69■■□□□ 1.06
RTN4-204ENST00000357732 TPM2P07951 284 aa21.69■■□□□ 1.06
RTN4-204ENST00000357732 MEIS3Q99687 375 aa21.69■■□□□ 1.06
RTN4-204ENST00000357732 PLEKHG3A1L390 1219 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 ZSCAN23Q3MJ62 389 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 MCM10Q7L590 875 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 ACEP12821 1306 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 TMEM2Q9UHN6 1383 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 OTUD7AQ8TE49 926 aaPredicted RBP21.68■■□□□ 1.06
RTN4-204ENST00000357732 PEAK1Q9H792 1746 aa21.68■■□□□ 1.06
RTN4-204ENST00000357732 SSH2Q76I76 1423 aa21.67■■□□□ 1.06
RTN4-204ENST00000357732 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
RTN4-204ENST00000357732 USP6P35125 1406 aa21.67■■□□□ 1.06
RTN4-204ENST00000357732 EPB41L2O43491 1005 aaKnown RBP21.67■■□□□ 1.06
RTN4-204ENST00000357732 TUBGCP6Q96RT7 1819 aa21.67■■□□□ 1.06
RTN4-204ENST00000357732 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 PDE1AP54750 535 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 ANAPC15P60006 121 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 GLIPR1L2Q4G1C9 344 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 IL17RAQ96F46 866 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 AK9Q5TCS8 1911 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 TERF1P54274 439 aa21.66■■□□□ 1.06
RTN4-204ENST00000357732 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
RTN4-204ENST00000357732 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
RTN4-204ENST00000357732 HSP90AB2PQ58FF8 381 aa21.65■■□□□ 1.06
RTN4-204ENST00000357732 CAVIN1Q6NZI2 390 aaKnown RBP21.65■■□□□ 1.06
RTN4-204ENST00000357732 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.06
RTN4-204ENST00000357732 KDRP35968 1356 aa21.64■■□□□ 1.06
RTN4-204ENST00000357732 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.64■■□□□ 1.05
RTN4-204ENST00000357732 MBD3O95983 291 aa21.64■■□□□ 1.05
RTN4-204ENST00000357732 MCCP23508 829 aa21.64■■□□□ 1.05
RTN4-204ENST00000357732 PDLIM2Q96JY6 352 aa21.64■■□□□ 1.05
RTN4-204ENST00000357732 SMARCA5O60264 1052 aaPredicted RBP21.63■■□□□ 1.05
RTN4-204ENST00000357732 GNAI2P04899 355 aa21.63■■□□□ 1.05
RTN4-204ENST00000357732 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
RTN4-204ENST00000357732 SOX12O15370 315 aa21.63■■□□□ 1.05
RTN4-204ENST00000357732 HTATSF1O43719 755 aaKnown RBP21.63■■□□□ 1.05
RTN4-204ENST00000357732 MSNP26038 577 aaKnown RBP21.63■■□□□ 1.05
RTN4-204ENST00000357732 INTS4Q96HW7 963 aaKnown RBP21.63■■□□□ 1.05
RTN4-204ENST00000357732 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
RTN4-204ENST00000357732 SRCIN1Q9C0H9 1055 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms