RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 FOXD4L5Q5VV16 416 aaPredicted RBP13.36□□□□□ -0.27
STAU1-201ENST00000340954 FOXD4L4Q8WXT5 416 aaPredicted RBP13.36□□□□□ -0.27
STAU1-201ENST00000340954 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
STAU1-201ENST00000340954 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
STAU1-201ENST00000340954 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
STAU1-201ENST00000340954 USP6P35125 1406 aa13.35□□□□□ -0.27
STAU1-201ENST00000340954 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
STAU1-201ENST00000340954 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
STAU1-201ENST00000340954 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
STAU1-201ENST00000340954 EYA1Q99502 592 aa13.35□□□□□ -0.27
STAU1-201ENST00000340954 MED14O60244 1454 aa13.34□□□□□ -0.27
STAU1-201ENST00000340954 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
STAU1-201ENST00000340954 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
STAU1-201ENST00000340954 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
STAU1-201ENST00000340954 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
STAU1-201ENST00000340954 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
STAU1-201ENST00000340954 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
STAU1-201ENST00000340954 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 IL16Q14005 1332 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 TECPR2O15040 1411 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
STAU1-201ENST00000340954 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
STAU1-201ENST00000340954 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
STAU1-201ENST00000340954 C3P01024 1663 aa13.32□□□□□ -0.28
STAU1-201ENST00000340954 ANKRD45Q5TZF3 282 aa13.32□□□□□ -0.28
STAU1-201ENST00000340954 CT47B1P0C2W7 299 aaPredicted RBP13.31□□□□□ -0.28
STAU1-201ENST00000340954 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
STAU1-201ENST00000340954 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
STAU1-201ENST00000340954 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
STAU1-201ENST00000340954 CLSTN1O94985 981 aa13.31□□□□□ -0.28
STAU1-201ENST00000340954 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
STAU1-201ENST00000340954 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
STAU1-201ENST00000340954 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
STAU1-201ENST00000340954 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
STAU1-201ENST00000340954 F6X3S4 739 aa13.3□□□□□ -0.28
STAU1-201ENST00000340954 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
STAU1-201ENST00000340954 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
STAU1-201ENST00000340954 HSPA2P54652 639 aa13.29□□□□□ -0.28
STAU1-201ENST00000340954 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
STAU1-201ENST00000340954 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
STAU1-201ENST00000340954 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
STAU1-201ENST00000340954 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
STAU1-201ENST00000340954 HOXC9P31274 260 aa13.28□□□□□ -0.28
STAU1-201ENST00000340954 ZC3H6P61129 1189 aaKnown RBP13.28□□□□□ -0.28
STAU1-201ENST00000340954 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.28
STAU1-201ENST00000340954 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
STAU1-201ENST00000340954 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
STAU1-201ENST00000340954 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
STAU1-201ENST00000340954 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
STAU1-201ENST00000340954 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
STAU1-201ENST00000340954 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
STAU1-201ENST00000340954 G2E3Q7L622 706 aa13.26□□□□□ -0.29
STAU1-201ENST00000340954 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
STAU1-201ENST00000340954 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
STAU1-201ENST00000340954 FLT4P35916 1363 aa13.26□□□□□ -0.29
STAU1-201ENST00000340954 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
STAU1-201ENST00000340954 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
STAU1-201ENST00000340954 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
STAU1-201ENST00000340954 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
STAU1-201ENST00000340954 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
STAU1-201ENST00000340954 PRDM16Q9HAZ2 1276 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 CHL1O00533 1208 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
STAU1-201ENST00000340954 SBNO1A3KN83 1393 aa13.23□□□□□ -0.29
STAU1-201ENST00000340954 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
STAU1-201ENST00000340954 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
STAU1-201ENST00000340954 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
STAU1-201ENST00000340954 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
STAU1-201ENST00000340954 ARHGAP23Q9P227 1491 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 ANXA1P04083 346 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
STAU1-201ENST00000340954 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
STAU1-201ENST00000340954 MEIS3Q99687 375 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 SLIT1O75093 1534 aa13.22□□□□□ -0.29
STAU1-201ENST00000340954 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
STAU1-201ENST00000340954 C16orf71Q8IYS4 520 aaPredicted RBP13.21□□□□□ -0.29
STAU1-201ENST00000340954 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
STAU1-201ENST00000340954 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
STAU1-201ENST00000340954 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
STAU1-201ENST00000340954 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
STAU1-201ENST00000340954 IL17REQ8NFR9 667 aa13.21□□□□□ -0.29
STAU1-201ENST00000340954 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
STAU1-201ENST00000340954 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 GCP02774 474 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 KRT28Q7Z3Y7 464 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
STAU1-201ENST00000340954 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
STAU1-201ENST00000340954 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
STAU1-201ENST00000340954 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
STAU1-201ENST00000340954 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms