RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
ATG4C-201ENST00000317868 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
ATG4C-201ENST00000317868 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
ATG4C-201ENST00000317868 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
ATG4C-201ENST00000317868 NCOA3Q9Y6Q9 1424 aa17.35■□□□□ 0.37
ATG4C-201ENST00000317868 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
ATG4C-201ENST00000317868 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
ATG4C-201ENST00000317868 LNPKQ9C0E8 428 aa17.34■□□□□ 0.37
ATG4C-201ENST00000317868 GSE1Q14687 1217 aa17.34■□□□□ 0.37
ATG4C-201ENST00000317868 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
ATG4C-201ENST00000317868 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
ATG4C-201ENST00000317868 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
ATG4C-201ENST00000317868 PTPRCP08575 1304 aa17.32■□□□□ 0.36
ATG4C-201ENST00000317868 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
ATG4C-201ENST00000317868 MCM10Q7L590 875 aa17.31■□□□□ 0.36
ATG4C-201ENST00000317868 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
ATG4C-201ENST00000317868 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
ATG4C-201ENST00000317868 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
ATG4C-201ENST00000317868 KRT24Q2M2I5 525 aa17.3■□□□□ 0.36
ATG4C-201ENST00000317868 NFAT5O94916 1531 aa17.3■□□□□ 0.36
ATG4C-201ENST00000317868 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
ATG4C-201ENST00000317868 MSH6P52701 1360 aa17.29■□□□□ 0.36
ATG4C-201ENST00000317868 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
ATG4C-201ENST00000317868 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
ATG4C-201ENST00000317868 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
ATG4C-201ENST00000317868 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
ATG4C-201ENST00000317868 LMO7Q8WWI1 1683 aa17.28■□□□□ 0.36
ATG4C-201ENST00000317868 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
ATG4C-201ENST00000317868 EYA1Q99502 592 aa17.27■□□□□ 0.36
ATG4C-201ENST00000317868 SNX21Q969T3 373 aa17.27■□□□□ 0.35
ATG4C-201ENST00000317868 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
ATG4C-201ENST00000317868 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
ATG4C-201ENST00000317868 DDIT3P35638 169 aa17.26■□□□□ 0.35
ATG4C-201ENST00000317868 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
ATG4C-201ENST00000317868 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
ATG4C-201ENST00000317868 KIF2CQ99661 725 aa17.25■□□□□ 0.35
ATG4C-201ENST00000317868 FOXO3O43524 673 aa17.25■□□□□ 0.35
ATG4C-201ENST00000317868 KCNA6P17658 529 aa17.25■□□□□ 0.35
ATG4C-201ENST00000317868 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
ATG4C-201ENST00000317868 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
ATG4C-201ENST00000317868 RPAP2Q8IXW5 612 aaPredicted RBP17.24■□□□□ 0.35
ATG4C-201ENST00000317868 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
ATG4C-201ENST00000317868 HOXC9P31274 260 aa17.23■□□□□ 0.35
ATG4C-201ENST00000317868 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
ATG4C-201ENST00000317868 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
ATG4C-201ENST00000317868 GSPT1P15170 499 aaKnown RBP17.23■□□□□ 0.35
ATG4C-201ENST00000317868 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
ATG4C-201ENST00000317868 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
ATG4C-201ENST00000317868 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
ATG4C-201ENST00000317868 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
ATG4C-201ENST00000317868 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
ATG4C-201ENST00000317868 AMPHP49418 695 aa17.2■□□□□ 0.34
ATG4C-201ENST00000317868 SOX12O15370 315 aa17.2■□□□□ 0.34
ATG4C-201ENST00000317868 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 NLRP6P59044 892 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 MEIS3Q99687 375 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 SLIT3O75094 1523 aa17.19■□□□□ 0.34
ATG4C-201ENST00000317868 CDC45O75419 566 aa17.18■□□□□ 0.34
ATG4C-201ENST00000317868 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
ATG4C-201ENST00000317868 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
ATG4C-201ENST00000317868 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
ATG4C-201ENST00000317868 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
ATG4C-201ENST00000317868 ADAMTS7Q9UKP4 1686 aa17.18■□□□□ 0.34
ATG4C-201ENST00000317868 G2E3Q7L622 706 aa17.17■□□□□ 0.34
ATG4C-201ENST00000317868 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
ATG4C-201ENST00000317868 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
ATG4C-201ENST00000317868 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
ATG4C-201ENST00000317868 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
ATG4C-201ENST00000317868 LMTK3Q96Q04 1460 aa17.14■□□□□ 0.34
ATG4C-201ENST00000317868 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
ATG4C-201ENST00000317868 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
ATG4C-201ENST00000317868 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
ATG4C-201ENST00000317868 MCM4P33991 863 aa17.14■□□□□ 0.33
ATG4C-201ENST00000317868 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
ATG4C-201ENST00000317868 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
ATG4C-201ENST00000317868 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
ATG4C-201ENST00000317868 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
ATG4C-201ENST00000317868 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
ATG4C-201ENST00000317868 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
ATG4C-201ENST00000317868 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
ATG4C-201ENST00000317868 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
ATG4C-201ENST00000317868 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
ATG4C-201ENST00000317868 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
ATG4C-201ENST00000317868 OTUD7AQ8TE49 926 aaPredicted RBP17.12■□□□□ 0.33
ATG4C-201ENST00000317868 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
ATG4C-201ENST00000317868 IP6K1Q92551 441 aa17.11■□□□□ 0.33
ATG4C-201ENST00000317868 F6X3S4 739 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 FLIIQ13045 1269 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 OVOS2A0A0G2JMS6 1433 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 MST1RQ04912 1400 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
ATG4C-201ENST00000317868 HMMRO75330 724 aa17.09■□□□□ 0.33
ATG4C-201ENST00000317868 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms