RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 OVOS2A0A0J9YW53 1432 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 OVOS2Q6IE36 1432 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 USP19O94966 1318 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 MS4A1P11836 297 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 NEUROD2Q15784 382 aa9.64□□□□□ -0.87
TRIM42-201ENST00000286349 MED1Q15648 1581 aaPredicted RBP9.63□□□□□ -0.87
TRIM42-201ENST00000286349 TMPOP42166 694 aaKnown RBP9.63□□□□□ -0.87
TRIM42-201ENST00000286349 CENPQQ7L2Z9 268 aaPredicted RBP9.63□□□□□ -0.87
TRIM42-201ENST00000286349 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
TRIM42-201ENST00000286349 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
TRIM42-201ENST00000286349 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
TRIM42-201ENST00000286349 GCP02774 474 aa9.63□□□□□ -0.87
TRIM42-201ENST00000286349 RRP7AQ9Y3A4 280 aaKnown RBP9.63□□□□□ -0.87
TRIM42-201ENST00000286349 ARHGEF10O15013 1369 aa9.62□□□□□ -0.87
TRIM42-201ENST00000286349 MARF1Q9Y4F3 1742 aaKnown RBP9.62□□□□□ -0.87
TRIM42-201ENST00000286349 SOX12O15370 315 aa9.62□□□□□ -0.87
TRIM42-201ENST00000286349 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
TRIM42-201ENST00000286349 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
TRIM42-201ENST00000286349 RARSP54136 660 aaKnown RBP9.61□□□□□ -0.87
TRIM42-201ENST00000286349 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
TRIM42-201ENST00000286349 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
TRIM42-201ENST00000286349 BCAR3O75815 825 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
TRIM42-201ENST00000286349 ZNF592Q92610 1267 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
TRIM42-201ENST00000286349 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 SLIT3O75094 1523 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 RIPK4P57078 832 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
TRIM42-201ENST00000286349 JCADQ9P266 1359 aa9.6□□□□□ -0.87
TRIM42-201ENST00000286349 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
TRIM42-201ENST00000286349 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 ZNF428Q96B54 188 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 FAM83GA6ND36 823 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 IL13P35225 146 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 TRIM35Q9UPQ4 493 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 NFAT5O94916 1531 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
TRIM42-201ENST00000286349 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 ILDR1Q86SU0 546 aaPredicted RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
TRIM42-201ENST00000286349 USP54Q70EL1 1684 aa9.58□□□□□ -0.88
TRIM42-201ENST00000286349 PTMAP06454 111 aaKnown RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 KCNH5Q8NCM2 988 aa9.58□□□□□ -0.88
TRIM42-201ENST00000286349 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
TRIM42-201ENST00000286349 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
TRIM42-201ENST00000286349 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
TRIM42-201ENST00000286349 PRKAR2BP31323 418 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 NBR1Q14596 966 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 CHRNA2Q15822 529 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 NFE2L2Q16236 605 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 KCNG1Q9UIX4 513 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 PLCD4Q9BRC7 762 aa9.57□□□□□ -0.88
TRIM42-201ENST00000286349 LRP6O75581 1613 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 ADAMTS2O95450 1211 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 CPDO75976 1380 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 MCCP23508 829 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 ANP32AP39687 249 aaKnown RBP9.56□□□□□ -0.88
TRIM42-201ENST00000286349 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
TRIM42-201ENST00000286349 ALDH1L2Q3SY69 923 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
TRIM42-201ENST00000286349 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 PHRF1Q9P1Y6 1649 aaKnown RBP9.55□□□□□ -0.88
TRIM42-201ENST00000286349 ZBTB7CA1YPR0 619 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 HOXC9P31274 260 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 IP6K1Q92551 441 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 KIF16BQ96L93 1317 aa9.55□□□□□ -0.88
TRIM42-201ENST00000286349 IPO8O15397 1037 aaKnown RBP9.54□□□□□ -0.88
TRIM42-201ENST00000286349 GNAI1P63096 354 aa9.54□□□□□ -0.88
TRIM42-201ENST00000286349 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
TRIM42-201ENST00000286349 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
TRIM42-201ENST00000286349 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
TRIM42-201ENST00000286349 PEAK1Q9H792 1746 aa9.54□□□□□ -0.88
TRIM42-201ENST00000286349 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
TRIM42-201ENST00000286349 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
TRIM42-201ENST00000286349 EXOSC9Q06265 439 aaKnown RBP9.54□□□□□ -0.88
TRIM42-201ENST00000286349 CLGNO14967 610 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 PDE4AP27815 886 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 AMPHP49418 695 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 PSMD1Q99460 953 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 SMC4Q9NTJ3 1288 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 PTMSP20962 102 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
TRIM42-201ENST00000286349 TSR2Q969E8 191 aaKnown RBP9.53□□□□□ -0.88
TRIM42-201ENST00000286349 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
TRIM42-201ENST00000286349 HMOX1P09601 288 aa9.52□□□□□ -0.88
TRIM42-201ENST00000286349 MVPQ14764 893 aaKnown RBP9.52□□□□□ -0.88
TRIM42-201ENST00000286349 PANK1Q8TE04 598 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms