RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
RPA1-201ENST00000254719 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
RPA1-201ENST00000254719 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
RPA1-201ENST00000254719 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
RPA1-201ENST00000254719 MYH16Q9H6N6 1097 aa11.67□□□□□ -0.54
RPA1-201ENST00000254719 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
RPA1-201ENST00000254719 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
RPA1-201ENST00000254719 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
RPA1-201ENST00000254719 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
RPA1-201ENST00000254719 MCM10Q7L590 875 aa11.65□□□□□ -0.54
RPA1-201ENST00000254719 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
RPA1-201ENST00000254719 SLIT3O75094 1523 aa11.65□□□□□ -0.54
RPA1-201ENST00000254719 PXDNQ92626 1479 aa11.65□□□□□ -0.54
RPA1-201ENST00000254719 HDGFL2Q7Z4V5 671 aaPredicted RBP11.65□□□□□ -0.54
RPA1-201ENST00000254719 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
RPA1-201ENST00000254719 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
RPA1-201ENST00000254719 G2E3Q7L622 706 aa11.64□□□□□ -0.55
RPA1-201ENST00000254719 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
RPA1-201ENST00000254719 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
RPA1-201ENST00000254719 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
RPA1-201ENST00000254719 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
RPA1-201ENST00000254719 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
RPA1-201ENST00000254719 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
RPA1-201ENST00000254719 KCNA6P17658 529 aa11.63□□□□□ -0.55
RPA1-201ENST00000254719 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
RPA1-201ENST00000254719 RTL1A6NKG5 1358 aa11.63□□□□□ -0.55
RPA1-201ENST00000254719 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
RPA1-201ENST00000254719 AAMPQ13685 434 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 ARHGEF10O15013 1369 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 HSP90AA1P07900 732 aaKnown RBP11.62□□□□□ -0.55
RPA1-201ENST00000254719 EYA1Q99502 592 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 TBX22Q9Y458 520 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 KIAA0232Q92628 1395 aa11.62□□□□□ -0.55
RPA1-201ENST00000254719 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
RPA1-201ENST00000254719 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
RPA1-201ENST00000254719 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
RPA1-201ENST00000254719 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
RPA1-201ENST00000254719 ANP32BQ92688 251 aaKnown RBP11.61□□□□□ -0.55
RPA1-201ENST00000254719 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
RPA1-201ENST00000254719 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
RPA1-201ENST00000254719 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 IL25Q9H293 177 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 ANKARQ7Z5J8 1434 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 MST1RQ04912 1400 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
RPA1-201ENST00000254719 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
RPA1-201ENST00000254719 SBNO1A3KN83 1393 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 UTRNP46939 3433 aa11.6□□□□□ -0.55
RPA1-201ENST00000254719 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
RPA1-201ENST00000254719 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
RPA1-201ENST00000254719 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
RPA1-201ENST00000254719 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
RPA1-201ENST00000254719 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
RPA1-201ENST00000254719 ITPRIPQ8IWB1 547 aa11.59□□□□□ -0.55
RPA1-201ENST00000254719 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
RPA1-201ENST00000254719 CHD1LQ86WJ1 897 aa11.58□□□□□ -0.56
RPA1-201ENST00000254719 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
RPA1-201ENST00000254719 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
RPA1-201ENST00000254719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
RPA1-201ENST00000254719 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
RPA1-201ENST00000254719 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
RPA1-201ENST00000254719 LNPKQ9C0E8 428 aa11.57□□□□□ -0.56
RPA1-201ENST00000254719 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
RPA1-201ENST00000254719 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
RPA1-201ENST00000254719 CEP85Q6P2H3 762 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 COG3Q96JB2 828 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 GSE1Q14687 1217 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 MEIS3Q99687 375 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 PKD1L3Q7Z443 1732 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 DCTPP1Q9H773 170 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 HOXC9P31274 260 aa11.56□□□□□ -0.56
RPA1-201ENST00000254719 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
RPA1-201ENST00000254719 FLT4P35916 1363 aa11.55□□□□□ -0.56
RPA1-201ENST00000254719 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
RPA1-201ENST00000254719 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
RPA1-201ENST00000254719 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
RPA1-201ENST00000254719 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
RPA1-201ENST00000254719 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 BMP2KLQ5H9B9 411 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
RPA1-201ENST00000254719 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
RPA1-201ENST00000254719 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
RPA1-201ENST00000254719 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 PAPPAQ13219 1627 aa11.54□□□□□ -0.56
RPA1-201ENST00000254719 TJP1Q07157 1748 aa11.53□□□□□ -0.56
RPA1-201ENST00000254719 GZF1Q9H116 711 aaPredicted RBP11.53□□□□□ -0.56
RPA1-201ENST00000254719 GNAI1P63096 354 aa11.53□□□□□ -0.56
RPA1-201ENST00000254719 NUP188Q5SRE5 1749 aa11.53□□□□□ -0.56
RPA1-201ENST00000254719 TCHHQ07283 1943 aa11.53□□□□□ -0.56
RPA1-201ENST00000254719 F6X3S4 739 aa11.52□□□□□ -0.57
RPA1-201ENST00000254719 KCNQ3O43525 872 aa11.52□□□□□ -0.57
RPA1-201ENST00000254719 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
RPA1-201ENST00000254719 TTC21AQ8NDW8 1320 aa11.52□□□□□ -0.57
RPA1-201ENST00000254719 NBPF6Q5VWK0 638 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms