RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PIK3CGP48736 1102 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 POLR2JP52435 117 aaKnown RBP15.65■□□□□ 0.1
NPHP4-211ENST00000622020 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 FSCN1Q16658 493 aaKnown RBP15.65■□□□□ 0.1
NPHP4-211ENST00000622020 PERM1Q5SV97 790 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 PACRGLQ8N7B6 248 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 GABPB2Q8TAK5 448 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-211ENST00000622020 TMBIM1Q969X1 311 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 ATOH8Q96SQ7 321 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 TBCDQ9BTW9 1192 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 HGH1Q9BTY7 390 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 CSNK1G1Q9HCP0 422 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 MRGBPQ9NV56 204 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 SUN2Q9UH99 717 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 ZNF225Q9UK10 706 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 SNAP91O60641 907 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 BCL10O95999 233 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 FDXRP22570 491 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 MLLT6P55198 1093 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-211ENST00000622020 MEP1AQ16819 746 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 EGFLAMQ63HQ2 1017 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 PRMT9Q6P2P2 845 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 R3HCC1LQ7Z5L2 792 aaKnown RBP15.65■□□□□ 0.1
NPHP4-211ENST00000622020 ABI1Q8IZP0 508 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 CFAP52Q8N1V2 620 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 OR52B6Q8NGF0 335 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 IGSF8Q969P0 613 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.65■□□□□ 0.19e-7■■■■■ 64.7
NPHP4-211ENST00000622020 CSF3RQ99062 836 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 GPR21Q99679 349 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 BPIFA1Q9NP55 256 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 INIPQ9NRY2 104 aa15.65■□□□□ 0.1
NPHP4-211ENST00000622020 SNX2O60749 519 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 GPIP06744 558 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 ALDH4A1P30038 563 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 GRK4P32298 578 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 LCP2Q13094 533 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 MANEALQ5VSG8 457 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 ANKS6Q68DC2 871 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 OVOS1Q6IE37 1185 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 SPATA2LQ8IUW3 424 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-211ENST00000622020 NSMCE2Q96MF7 247 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 SLC52A3Q9NQ40 469 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 SLC27A5Q9Y2P5 690 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 ST14Q9Y5Y6 855 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 COMMD10Q9Y6G5 202 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 NYNRINQ9P2P1 1898 aaKnown RBP15.64■□□□□ 0.09
NPHP4-211ENST00000622020 C17orf102A2RUQ5 167 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 IQCF5A8MTL0 148 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 OR1I1O60431 355 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 ATP4BP51164 291 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 RELAQ04206 551 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 SLC14A2Q15849 920 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 CCL14Q16627 93 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 UPP1Q16831 310 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 CCNYL2Q5T2Q4 361 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 IQSEC1Q6DN90 963 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 METTL23Q86XA0 190 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 KLHDC8BQ8IXV7 354 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 CATSPERZQ9NTU4 200 aa15.64■□□□□ 0.09
NPHP4-211ENST00000622020 EIF2B4Q9UI10 523 aaKnown RBP15.64■□□□□ 0.09
NPHP4-211ENST00000622020 MROH6A6NGR9 719 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 H0Y858 1186 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 IGLV3-25P01717 112 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ATXN1LP0C7T5 689 aaKnown RBP15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ODC1P11926 461 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 AGXTP21549 392 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 IL1RL1Q01638 556 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ZNF33AQ06730 810 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 SLC39A12Q504Y0 691 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ARTNQ5T4W7 220 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 MRNIPQ6NTE8 343 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 DTWD1Q8N5C7 304 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 OR4L1Q8NH43 312 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 RMDN1Q96DB5 314 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 MYEOVQ96EZ4 313 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 CCDC68Q9H2F9 335 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 TLR9Q9NR96 1032 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ZNHIT2Q9UHR6 403 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 PAIP2BQ9ULR5 123 aaKnown RBP15.63■□□□□ 0.09
NPHP4-211ENST00000622020 CCL15-CCL14A0A0B4J2E2 113 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 FGF4P08620 206 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ZNF135P52742 658 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-211ENST00000622020 ARSFP54793 590 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 CCL15Q16663 113 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 BRMS1LQ5PSV4 323 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 TBC1D21Q8IYX1 336 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 SIDT2Q8NBJ9 832 aaKnown RBP15.63■□□□□ 0.09
NPHP4-211ENST00000622020 CCDC138Q96M89 665 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 RPRD1AQ96P16 312 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-211ENST00000622020 BEGAINQ9BUH8 593 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 BDH2Q9BUT1 245 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 NTN4Q9HB63 628 aa15.63■□□□□ 0.09
NPHP4-211ENST00000622020 GNGT2O14610 69 aa15.62■□□□□ 0.09
NPHP4-211ENST00000622020 AXIN1O15169 862 aa15.62■□□□□ 0.09
NPHP4-211ENST00000622020 NIPSNAP2O75323 286 aa15.62■□□□□ 0.09
NPHP4-211ENST00000622020 FSHRP23945 695 aa15.62■□□□□ 0.09
NPHP4-211ENST00000622020 MTHFRP42898 656 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms