RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 LRRN4Q8WUT4 740 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 CPLX3Q8WVH0 158 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PLEKHG4BQ96PX9 1271 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 TRIB3Q96RU7 358 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 TBC1D10AQ9BXI6 508 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 ZFYVE1Q9HBF4 777 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 MAGEE1Q9HCI5 957 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 APMAPQ9HDC9 416 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PRDM8Q9NQV8 689 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 DTLQ9NZJ0 730 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 UVRAGQ9P2Y5 699 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 LCMT1Q9UIC8 334 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 LUC7L2Q9Y383 392 aaKnown RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 CLEC18AA5D8T8 446 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 KCNK1O00180 336 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 CHUKO15111 745 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 TOX3O15405 576 aaPredicted RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 SLC25A14O95258 325 aaPredicted RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 DLGAP3O95886 979 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 C9P02748 559 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 KDELR1P24390 212 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 HNRNPH3P31942 346 aaKnown RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 UBASH3AP57075 661 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 DCDC1P59894 354 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 MC1RQ01726 317 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 MAP7Q14244 749 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 PDPK2PQ6A1A2 396 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 TMC3Q7Z5M5 1100 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 UNC5BQ8IZJ1 945 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 ESX1Q8N693 406 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 CLEC18CQ8NCF0 446 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 GPR26Q8NDV2 337 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 APOBEC4Q8WW27 367 aaKnown RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 RNF157Q96PX1 679 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 OR2AG1Q9H205 316 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 KLC4Q9NSK0 619 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 SIDT1Q9NXL6 827 aaKnown RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 CTTNBP2NLQ9P2B4 639 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 NFKBIL1Q9UBC1 381 aaPredicted RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 ANAPC2Q9UJX6 822 aa10.46□□□□□ -0.73
RFFL-209ENST00000581265 MN1Q10571 1320 aaPredicted RBP10.46□□□□□ -0.73
RFFL-209ENST00000581265 LRRK2Q5S007 2527 aa10.46□□□□□ -0.74
RFFL-209ENST00000581265 BSNQ9UPA5 3926 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 PRR19A6NJB7 356 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 H2AFZP0C0S5 128 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 OAS2P29728 719 aaKnown RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 GJC1P36383 396 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 CASRP41180 1078 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 SLC19A1P41440 591 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 STAT5AP42229 794 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 MAPK9P45984 424 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 CDC20Q12834 499 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 ZBTB17Q13105 803 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 ZNF569Q5MCW4 686 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 ABRAXAS1Q6UWZ7 409 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 WASH2PQ6VEQ5 465 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 TMEM26Q6ZUK4 368 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 H2AFVQ71UI9 128 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 KDELC2Q7Z4H8 507 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 ADGRG6Q86SQ4 1221 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 VSIG1Q86XK7 387 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 TRAM1L1Q8N609 369 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 PLD5Q8N7P1 536 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 C9orf43Q8TAL5 461 aaPredicted RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 GLYATL1Q969I3 302 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 TADA1Q96BN2 335 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 IMP4Q96G21 291 aaKnown RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 C9orf72Q96LT7 481 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 ZNF830Q96NB3 372 aaPredicted RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 SPATA16Q9BXB7 569 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 CBX8Q9HC52 389 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 WASH6PQ9NQA3 447 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 OGFRQ9NZT2 677 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 SCHIP1Q9P0W5 487 aaPredicted RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 ZNF624Q9P2J8 865 aaPredicted RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 SLC23A2Q9UGH3 650 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 KLHL3Q9UH77 587 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 SLC30A1Q9Y6M5 507 aa10.45□□□□□ -0.74
RFFL-209ENST00000581265 TEP1Q99973 2627 aaKnown RBP10.45□□□□□ -0.74
RFFL-209ENST00000581265 KMOO15229 486 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 VEGFDO43915 354 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 UBXN7O94888 489 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 AGFG2O95081 481 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 VIPP01282 170 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 GYPCP04921 128 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 PRKAR1AP10644 381 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 ZNF7P17097 686 aaPredicted RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 TCN2P20062 427 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 NOP2P46087 812 aaKnown RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 GFERP55789 205 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 TPM4P67936 248 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 GALNT3Q14435 633 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms