RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TICRRQ7Z2Z1 1910 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 NPEPPSL1A6NEC2 478 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 NCF1BA6NI72 391 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 NCF1CA8MVU1 366 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 TMEM114B3SHH9 223 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 SLC25A14O95258 325 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 TRIM16O95361 564 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 NCF1P14598 390 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 ZNF7P17097 686 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 GM2AP17900 193 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 IDH3AP50213 366 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 KPNA2P52292 529 aaKnown RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 CDH13P55290 713 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 NCALDP61601 193 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 CCDC15Q0P6D6 951 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 SETDB1Q15047 1291 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 PFKFB4Q16877 469 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 SLC9B1Q4ZJI4 515 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 PTRHD1Q6GMV3 140 aaKnown RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 CPA6Q8N4T0 437 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 ESAMQ96AP7 390 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 ARRDC3Q96B67 414 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 MSLNLQ96KJ4 702 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 RILPQ96NA2 401 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 WRAP53Q9BUR4 548 aaKnown RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 DERL2Q9GZP9 239 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 CDH19Q9H159 772 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 SYTL2Q9HCH5 934 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 TRMT6Q9UJA5 497 aaKnown RBP11.24□□□□□ -0.61
LINC00562-201ENST00000566385 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 PPM1HQ9ULR3 514 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 COQ6Q9Y2Z9 468 aa11.24□□□□□ -0.61
LINC00562-201ENST00000566385 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 BTN3A1O00481 513 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 UBFD1O14562 309 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PFDN6O15212 129 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 VIPR1P32241 457 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 ZBTB16Q05516 673 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 KHDC1Q4VXA5 237 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 ZNF648Q5T619 568 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 DET1Q7L5Y6 550 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 MMAAQ8IVH4 418 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 MICALL1Q8N3F8 863 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 KIAA1191Q96A73 305 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 FUBP1Q96AE4 644 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 SPATA16Q9BXB7 569 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 ILKAPQ9H0C8 392 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 WDR55Q9H6Y2 383 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 DHRS7Q9Y394 339 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 DOCK9Q9BZ29 2069 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 FADS2P1A8MWK0 482 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 H3BQ06 376 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 FCHO1O14526 889 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PYGLP06737 847 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 EPHX1P07099 455 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 MMP12P39900 470 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 HK3P52790 923 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 ALDH18A1P54886 795 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 DNAJB13P59910 316 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 IL2P60568 153 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 EIF4HQ15056 248 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 GPR33Q49SQ1 333 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 ZNF678Q5SXM1 525 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 LIPIQ6XZB0 460 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PIWIL4Q7Z3Z4 852 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 KIF2BQ8N4N8 673 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 NSUN5Q96P11 429 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 PLEKHG4BQ96PX9 1271 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 GSTO2Q9H4Y5 243 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
LINC00562-201ENST00000566385 FIS1Q9Y3D6 152 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 RAP2CQ9Y3L5 183 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 CAPN7Q9Y6W3 813 aa11.23□□□□□ -0.61
LINC00562-201ENST00000566385 GOLGA8QA0A0J9YX86 632 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 GOLGA8OA6NCC3 632 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 GOLGA8NF8WBI6 632 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 MATN2O00339 956 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 GRID2O43424 1007 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 ECI2O75521 394 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 SUPT7LO94864 414 aa11.22□□□□□ -0.61
LINC00562-201ENST00000566385 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
LINC00562-201ENST00000566385 IMPDH1P20839 514 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms