RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SPAG4Q9NPE6 437 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SDR39U1Q9NRG7 319 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CFAP97Q9P2B7 532 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TMEM181Q9P2C4 612 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 POLG2Q9UHN1 485 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 EVLQ9UI08 416 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 A0A0J9YYE9 177 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 PRSS51A0A1B0GVH4 220 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 DPPA5A6NC42 116 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 GAPDHSO14556 408 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TGM5O43548 720 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SOCS5O75159 536 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TRBC1P01850 177 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CAPNS1P04632 268 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CLTBP09497 229 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 LINC00032P0C843 101 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 PRR35P0CG20 571 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 MRPL19P49406 292 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 LMAN2Q12907 356 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CAPRIN2Q6IMN6 1127 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 APLFQ8IW19 511 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 BBS7Q8IWZ6 715 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 MIER2Q8N344 545 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 OR56A4Q8NGH8 313 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TUBGCP3Q96CW5 907 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 BTBD9Q96Q07 612 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 HGH1Q9BTY7 390 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 GIMAP2Q9UG22 337 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 RIMS3Q9UJD0 308 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CLEC4EQ9ULY5 219 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 OBSL1O75147 1896 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CXorf51AA0A1B0GTR3 108 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 NCF1BA6NI72 391 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 IQCF5A8MTL0 148 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 NCF1CA8MVU1 366 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 GPR39O43194 453 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SNX2O60749 519 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 EFCAB14O75071 495 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF821O75541 412 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CKMP06732 381 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CTSAP10619 480 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 UROSP10746 265 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 HGFP14210 728 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 NCF1P14598 390 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 UQCRBP14927 111 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PRDX3P30048 256 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 AQP4P55087 323 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ECT2LQ008S8 904 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ADGRE1Q14246 886 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TGFBIQ15582 683 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 KIF19Q2TAC6 998 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 FBXO48Q5FWF7 155 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 XKR7Q5GH72 579 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SPATA19Q7Z5L4 167 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SERPINA9Q86WD7 417 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 FAM156AQ8NDB6 213 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 OR6K2Q8NGY2 324 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 KLHL32Q96NJ5 620 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PLEKHG4BQ96PX9 1271 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 GPATCH1Q9BRR8 931 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SARS2Q9NP81 518 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 NUDT4Q9NZJ9 180 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CD274Q9NZQ7 290 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 DLGAP2Q9P1A6 1054 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 EPS15L1Q9UBC2 864 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 BTRCQ9Y297 605 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 NDUFAF1Q9Y375 327 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 KIAA1671Q9BY89 1806 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PRORSD1PA6NEY8 169 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 E2F3O00716 465 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CRCPO75575 148 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PRAMEF1O95521 474 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 C8BP07358 591 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 IDO1P14902 403 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TCN1P20061 433 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 HNF1BP35680 557 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 GRIK2Q13002 908 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PLEKHG6Q3KR16 790 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 GPRIN3Q6ZVF9 776 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms