RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 CLPPQ16740 277 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-204ENST00000503215 TFDP3Q5H9I0 405 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 SIRPB2Q5JXA9 342 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 TMEM71Q6P5X7 295 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF547Q8IVP9 402 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 RCOR2Q8IZ40 523 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 TTC30BQ8N4P2 665 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 TRAM1L1Q8N609 369 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 ART4Q93070 314 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 MRGPRX2Q96LB1 330 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 SARS2Q9NP81 518 aaKnown RBP16.05■□□□□ 0.16
SCLT1-204ENST00000503215 KLC4Q9NSK0 619 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 FAM153AQ9UHL3 310 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 B3GALT1Q9Y5Z6 326 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF462Q96JM2 2506 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 SDK2Q58EX2 2172 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 CHUKO15111 745 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 GPR39O43194 453 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 BUD23O43709 281 aaKnown RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 F3P13726 295 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 MAPK9P45984 424 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 PPM1FP49593 454 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 PTPRCAPQ14761 206 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 PID1Q7Z2X4 250 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 CCDC50Q8IVM0 306 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 NCSTNQ92542 709 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 P3H4Q92791 437 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 PLEKHG4BQ96PX9 1271 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 ZSCAN5AQ9BUG6 496 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 OSGEPL1Q9H4B0 414 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 AKAP7Q9P0M2 348 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 PDP2Q9P2J9 529 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 NFKBIL1Q9UBC1 381 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 CPNE7Q9UBL6 633 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 DNAJC16Q9Y2G8 782 aa16.04■□□□□ 0.16
SCLT1-204ENST00000503215 REXO2Q9Y3B8 237 aaKnown RBP16.04■□□□□ 0.16
SCLT1-204ENST00000503215 EFCAB7A8K855 629 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 ZW10O43264 779 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 ZIC2O95409 532 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 UBE2IP63279 158 aaKnown RBP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 CYP4F2P78329 520 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 GPLD1P80108 840 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 BMPERQ8N8U9 685 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 AGBL5Q8NDL9 886 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 IPMKQ8NFU5 416 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 OR10G6Q8NH81 332 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 WBP1Q96G27 269 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 AHCYL2Q96HN2 611 aaKnown RBP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■■□□ 17.4
SCLT1-204ENST00000503215 FCRL5Q96RD9 977 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 TAAR9Q96RI9 348 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 FAM118BQ9BPY3 351 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 IL26Q9NPH9 171 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF624Q9P2J8 865 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-204ENST00000503215 SLC30A1Q9Y6M5 507 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 COL6A6A6NMZ7 2263 aa16.03■□□□□ 0.16
SCLT1-204ENST00000503215 PRR19A6NJB7 356 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A9O60656 530 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 BRAFP15056 766 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF7P17097 686 aaPredicted RBP16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A6P19224 532 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A1P22309 533 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A4P22310 534 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 CSTF2P33240 577 aaKnown RBP eCLIP16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A3P35503 534 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF75DP51815 510 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 OLIG2Q13516 323 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 SPA17Q15506 151 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 CHRNA6Q15825 494 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.16
SCLT1-204ENST00000503215 LINC00303Q3SY05 128 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 MANEAQ5SRI9 462 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 ANKS6Q68DC2 871 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 C11orf63Q6NUN7 778 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 AADACL2Q6P093 401 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 BBS12Q6ZW61 710 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 ARHGAP22Q7Z5H3 698 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 FAM129CQ86XR2 697 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 EXD3Q8N9H8 876 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 HTR3CQ8WXA8 447 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 CTRCQ99895 268 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 ZMYND15Q9H091 742 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A7Q9HAW7 530 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A10Q9HAW8 530 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 UGT1A8Q9HAW9 530 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 SLC39A1Q9NY26 324 aa16.02■□□□□ 0.16
SCLT1-204ENST00000503215 OGFRQ9NZT2 677 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms