RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MAP4P27816 1152 aaKnown RBP12.48□□□□□ -0.41
SKA1-205ENST00000494518 SEPHS1P49903 392 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 PCSK7Q16549 785 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 ZNF569Q5MCW4 686 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 PHYKPLQ8IUZ5 450 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 C9orf43Q8TAL5 461 aaPredicted RBP12.48□□□□□ -0.41
SKA1-205ENST00000494518 STARD8Q92502 1023 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 RAPGEF5Q92565 580 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 SH3KBP1Q96B97 665 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 TGM7Q96PF1 710 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 PLEKHG4BQ96PX9 1271 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
SKA1-205ENST00000494518 OGFRQ9NZT2 677 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 TRIM10Q9UDY6 481 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 SLC23A2Q9UGH3 650 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
SKA1-205ENST00000494518 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
SKA1-205ENST00000494518 MED13Q9UHV7 2174 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 KIR2DS5A0A0G2JLQ3 304 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 A0A0G2JNG1 304 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 KIR2DS3K7RE56 304 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 DLGAP3O95886 979 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 SLC2A4P14672 509 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 MX2P20592 715 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 F8A1P23610 371 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 PBX1P40424 430 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 LEPRP48357 1165 aaKnown RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 EPHA4P54764 986 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 RPL26P61254 145 aaKnown RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 UBE2IP63279 158 aaKnown RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 SH3BP2P78314 561 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 ZBED6P86452 979 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 AP1B1Q10567 949 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 KIR2DS5Q14953 304 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 PDK2Q15119 407 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 INSCQ1MX18 579 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 NPNTQ6UXI9 565 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 TRIM48Q8IWZ4 208 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 CNTD1Q8N815 330 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 GPR26Q8NDV2 337 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 FAF2Q96CS3 445 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 CATSPER2Q96P56 530 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 CARD9Q9H257 536 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 RMI1Q9H9A7 625 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 ZFYVE1Q9HBF4 777 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 FBXO8Q9NRD0 319 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 SIDT1Q9NXL6 827 aaKnown RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 AMACRQ9UHK6 382 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 RPL26L1Q9UNX3 145 aaKnown RBP12.47□□□□□ -0.41
SKA1-205ENST00000494518 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
SKA1-205ENST00000494518 MN1Q10571 1320 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 LILRA5A6NI73 299 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 MTA2O94776 668 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 VIPP01282 170 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 GYPCP04921 128 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 AMD1P17707 334 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 TCN2P20062 427 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 RPL10P27635 214 aaKnown RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 MAN1A1P33908 653 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 STAT5AP42229 794 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 UBASH3AP57075 661 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ABHD18Q0P651 414 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 MESDQ14696 234 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 KHDC1Q4VXA5 237 aaKnown RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 ADGRG6Q86SQ4 1221 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 PLXDC1Q8IUK5 500 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 MAP7D3Q8IWC1 876 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 GALNT6Q8NCL4 622 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 RSC1A1Q92681 617 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 SYN2Q92777 582 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 FATE1Q969F0 183 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ABHD17AQ96GS6 310 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 C9orf72Q96LT7 481 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 AGAP3Q96P47 875 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 RNF157Q96PX1 679 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ADGRE3Q9BY15 652 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ULBP3Q9BZM4 244 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 BPIFA1Q9NP55 256 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ZNF624Q9P2J8 865 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 TMEM184BQ9Y519 407 aaPredicted RBP12.46□□□□□ -0.41
SKA1-205ENST00000494518 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 RPS6KL1Q9Y6S9 549 aa12.46□□□□□ -0.41
SKA1-205ENST00000494518 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms