RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 CRTC3Q6UUV7 619 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 ZNF534Q76KX8 674 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 PIAS4Q8N2W9 510 aaPredicted RBP13.81□□□□□ -0.2
CCM2-217ENST00000492883 DDHD1Q8NEL9 900 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 OR6P1Q8NGX9 317 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 HDAC10Q969S8 669 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 DCUN1D1Q96GG9 259 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 XAB2Q9HCS7 855 aaKnown RBP13.81□□□□□ -0.2
CCM2-217ENST00000492883 NCKIPSDQ9NZQ3 722 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 SLC2A6Q9UGQ3 507 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 PLEKHM1Q9Y4G2 1056 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 PCYT1BQ9Y5K3 369 aaPredicted RBP13.81□□□□□ -0.2
CCM2-217ENST00000492883 ADAMTS9Q9P2N4 1935 aa13.81□□□□□ -0.2
CCM2-217ENST00000492883 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 SDR42E2A6NKP2 422 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 DNALI1O14645 258 aaPredicted RBP13.8□□□□□ -0.2
CCM2-217ENST00000492883 KMOO15229 486 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 FTH1P19P0C7X4 201 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 RALBP11234 206 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 MLNP12872 115 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 ACP5P13686 325 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 PSMA3P25788 255 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 C2orf54Q08AI8 447 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 LRP8Q14114 963 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 NR0B2Q15466 257 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 RNASEH2BQ5TBB1 312 aaKnown RBP13.8□□□□□ -0.2
CCM2-217ENST00000492883 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 CASC4Q6P4E1 433 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 ERMP1Q7Z2K6 904 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 MAATS1Q7Z4T9 603 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 SLCO6A1Q86UG4 719 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 LRRTM4Q86VH4 590 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 CAND1Q86VP6 1230 aaKnown RBP13.8□□□□□ -0.2
CCM2-217ENST00000492883 NRROSQ86YC3 692 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 TRAPPC5Q8IUR0 188 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 PNPLA1Q8N8W4 532 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 RASGEF1AQ8N9B8 481 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 NAT8LQ8N9F0 302 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 HEXDCQ8WVB3 486 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 PEX13Q92968 403 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 ZNF778Q96MU6 729 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 SERPINB12Q96P63 405 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 TRIM51Q9BSJ1 452 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 TRIM31Q9BZY9 425 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 SPATS2LQ9NUQ6 558 aaKnown RBP13.8□□□□□ -0.2
CCM2-217ENST00000492883 SYBUQ9NX95 663 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 SAMD15Q9P1V8 674 aa13.8□□□□□ -0.2
CCM2-217ENST00000492883 DOCK9Q9BZ29 2069 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 GVINP1Q7Z2Y8 2422 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 PIEZO1Q92508 2521 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 MAGEB16A2A368 324 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 CPED1A4D0V7 1026 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 OR51F1A6NGY5 319 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 AGAP14A8MT82 685 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 EFCAB8A8MWE9 144 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 B4DGG1 531 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 CFAP99D6REC4 459 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 CHUKO15111 745 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 CKMT1AP12532 417 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
CCM2-217ENST00000492883 MRPS25P82663 173 aaKnown RBP13.79□□□□□ -0.2
CCM2-217ENST00000492883 WHAMMP3Q1A5X7 153 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 INSCQ1MX18 579 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 TMEM220Q6QAJ8 160 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 AFTPHQ6ULP2 937 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 SERPINA9Q86WD7 417 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 SLC35F3Q8IY50 421 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 ARL10Q8N8L6 244 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 OR13J1Q8NGT2 312 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 OR4L1Q8NH43 312 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCM2-217ENST00000492883 TTC1Q99614 292 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 COPS8Q99627 209 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 KIFC1Q9BW19 673 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 ZDHHC3Q9NYG2 299 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 ANAPC5Q9UJX4 755 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 PADI4Q9UM07 663 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 PCDHGA1Q9Y5H4 931 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
CCM2-217ENST00000492883 PI4KAP42356 2102 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 FAM187AA6NFU0 413 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 OR2AG2A6NM03 316 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 SNX2O60749 519 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 RFPL3O75679 317 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 POP7O75817 140 aaKnown RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 GOT2P00505 430 aaKnown RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 PRSS56P0CW18 603 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 VCLP18206 1134 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ACP1P24666 158 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ACRV1P26436 265 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms