RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TDRD1Q9BXT4 1180 aaKnown RBP7.29□□□□□ -1.24
NPHP3-208ENST00000490993 SUV39H2Q9H5I1 410 aa7.29□□□□□ -1.24
NPHP3-208ENST00000490993 PLK2Q9NYY3 685 aa7.29□□□□□ -1.24
NPHP3-208ENST00000490993 SLC7A8Q9UHI5 535 aa7.29□□□□□ -1.24
NPHP3-208ENST00000490993 POMPQ9Y244 141 aa7.29□□□□□ -1.24
NPHP3-208ENST00000490993 TTC24A2A3L6 582 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 C5orf58C9J3I9 102 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 G3V2L1 256 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 INPP4BO15327 924 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 STK16O75716 305 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FGF18O76093 207 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 IFNA14P01570 189 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 UGT2B4P06133 528 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF23P17027 643 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PBLDP30039 288 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 IRF8Q02556 426 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TNK2Q07912 1038 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF678Q5SXM1 525 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TXNDC8Q6A555 127 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CXorf40AQ8TE69 158 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SLC7A6OSQ96CW6 309 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 OR52B2Q96RD2 323 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TNKS2Q9H2K2 1166 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FAM83DQ9H4H8 585 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZBTB26Q9HCK0 441 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FAF1Q9UNN5 650 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 KCTD3Q9Y597 815 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PIP5K1BO14986 540 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SNAP91O60641 907 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 NBNO60934 754 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ECI2O75521 394 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FKBP9O95302 570 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PABPC1P11940 636 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PCNAP12004 261 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 HPCAL1P37235 193 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 POLR2JP52435 117 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 DDX39BQ13838 428 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF549Q6P9A3 640 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FKBP9P1Q75LS8 142 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 HORMAD1Q86X24 394 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CPNE9Q8IYJ1 553 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 LZICQ8WZA0 190 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 GFM2Q969S9 779 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 MED8Q96G25 268 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 WDR83Q9BRX9 315 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FEM1AQ9BSK4 669 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TLE6Q9H808 572 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 NOL11Q9H8H0 719 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 LOC285095A0A1B0GVY8 99 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PGLSO95336 258 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ELFN1P0C7U0 828 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CD1DP15813 335 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF37AP17032 561 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF30P17039 623 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 RPL3P39023 403 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 GNPDA1P46926 289 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SLC7A2P52569 658 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FPGSQ05932 587 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 MAPKAPK3Q16644 382 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TRIM71Q2Q1W2 868 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CYP2R1Q6VVX0 501 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TRMT11Q7Z4G4 463 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 DNAJB8Q8NHS0 232 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 OTUB2Q96DC9 234 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 C1QTNF7Q9BXJ2 289 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 RAD21L1Q9H4I0 556 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 BRD9Q9H8M2 597 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 IPPKQ9H8X2 491 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ABCB8Q9NUT2 735 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 MAGEL2Q9UJ55 1249 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 COPG1Q9Y678 874 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 DOCK5Q9H7D0 1870 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PLXNB2O15031 1838 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 IGLV3-10A0A075B6K4 115 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 F8W810 466 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PER2O15055 1255 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ATG13O75143 517 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CLDN9O95484 217 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 UQCRBP14927 111 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CHN2P52757 468 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ECT2LQ008S8 904 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CAP1Q01518 475 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ACSM2AQ08AH3 577 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 EPS8Q12929 822 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 MYLK3Q32MK0 819 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SPDYE7PQ495Y7 208 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ACSM2BQ68CK6 577 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 PRR23BQ6ZRT6 265 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CEP97Q8IW35 865 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SYTL1Q8IYJ3 562 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 AHI1Q8N157 1196 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TEX26Q8N6G2 289 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TERB1Q8NA31 727 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 TXNDC5Q8NBS9 432 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 ITFG1Q8TB96 612 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms