RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TRPV2Q9Y5S1 764 aa5.66□□□□□ -1.5
CDKN3-203ENST00000395577 HS3ST3B1Q9Y662 390 aa5.66□□□□□ -1.5
CDKN3-203ENST00000395577 YTHDC2Q9H6S0 1430 aaKnown RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 KIF1BO60333 1816 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 DLC1Q96QB1 1528 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 A0A1W2PR77 199 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 MS4A18H0YCH9 400 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 ABCB1P08183 1280 aaPredicted RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 G6PDP11413 515 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 ARSBP15848 533 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 MAOAP21397 527 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 HOXC9P31274 260 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 EIF2S3P41091 472 aaKnown RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 GPR143P51810 404 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 GRSF1Q12849 480 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 GRAPQ13588 217 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 GPR18Q14330 331 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PTGR1Q14914 329 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 RBMS2Q15434 407 aaKnown RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 SRSF7Q16629 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PNLIPRP3Q17RR3 467 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 EIF2S3LQ2VIR3 472 aaKnown RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 KRT79Q5XKE5 535 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 SHFQ7M4L6 423 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 ZNF367Q7RTV3 350 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 CTU1Q7Z7A3 348 aaKnown RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 ANKRD23Q86SG2 305 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 SDCCAG8Q86SQ7 713 aaPredicted RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 EPHX4Q8IUS5 362 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 MCEMP1Q8IX19 187 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 ARFGAP1Q8N6T3 406 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 MCUQ8NE86 351 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PIGOQ8TEQ8 1089 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PGAP3Q96FM1 320 aaPredicted RBP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 EGLN2Q96KS0 407 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 NUDCD1Q96RS6 583 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 MRIQ9BWK5 157 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PIGMQ9H3S5 423 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 PPP1R3EQ9H7J1 279 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 CATSPERBQ9H7T0 1116 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 BCCIPQ9P287 314 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDKN3-203ENST00000395577 COPG2Q9UBF2 871 aa5.65□□□□□ -1.5
CDKN3-203ENST00000395577 A0A1B0GVM2 712 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 CGB1A6NKQ9 187 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 A6NL46 340 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 CCER2I3L3R5 266 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 I6L893 689 aaPredicted RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ITM2AO43736 263 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 AKAP8O43823 692 aaKnown RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 AFPP02771 609 aaKnown RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 CYP1A2P05177 515 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 UBA1P22314 1058 aaKnown RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 EEF1DP29692 281 aaKnown RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 MMP13P45452 471 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 COMPP49747 757 aaPredicted RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 RAD23BP54727 409 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ZP1P60852 638 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 TMF1P82094 1093 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ECT2LQ008S8 904 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 DLG2Q15700 870 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 C9orf152Q5JTZ5 239 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 Q6ZSV7 163 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 CACNA2D4Q7Z3S7 1137 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 PIP4P1Q86T03 277 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 MMP21Q8N119 569 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 TMEM199Q8N511 208 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 MIGA1Q8NAN2 632 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 C7orf57Q8NEG2 295 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 TRPC4APQ8TEL6 797 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 KRCC1Q9NPI7 259 aaPredicted RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ACSS1Q9NUB1 689 aaPredicted RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 OR14J1Q9UGF5 321 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 TTC7AQ9ULT0 858 aaPredicted RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 NUP188Q5SRE5 1749 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 GOLGB1Q14789 3259 aaKnown RBP5.64□□□□□ -1.51
CDKN3-203ENST00000395577 ANKARQ7Z5J8 1434 aa5.64□□□□□ -1.51
CDKN3-203ENST00000395577 RGPD1P0DJD0 1748 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 RGPD8O14715 1765 aaPredicted RBP5.63□□□□□ -1.51
CDKN3-203ENST00000395577 LOC102723996A0A087X1L8 192 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 KANSL1LA0AUZ9 987 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 LNP1A1A4G5 178 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 H0YGN5 161 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 TBX10O75333 385 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 FGBP02675 491 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 ICAM1P05362 532 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 TPOP07202 933 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 DDX5P17844 614 aaKnown RBP5.63□□□□□ -1.51
CDKN3-203ENST00000395577 MSH2P43246 934 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 ME1P48163 572 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 ENTPD1P49961 510 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 SREBF2Q12772 1141 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 GRIK2Q13002 908 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 CTTNQ14247 550 aaKnown RBP5.63□□□□□ -1.51
CDKN3-203ENST00000395577 PLCB4Q15147 1175 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 EZH2Q15910 746 aaKnown RBP5.63□□□□□ -1.51
CDKN3-203ENST00000395577 ZNF805Q5CZA5 627 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 TCP11X2Q5H9J9 407 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 MTX3Q5HYI7 312 aa5.63□□□□□ -1.51
CDKN3-203ENST00000395577 MORN5Q5VZ52 161 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms