RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 FAM149AA5PLN7 773 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 SUPT3HB4E1H0 165 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 EFCAB14O75071 495 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 SUPT3HO75486 399 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 RHOBTB1O94844 696 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 OR1G1P47890 313 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 TAF10Q12962 218 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 TSNQ15631 228 aaKnown RBP13.76□□□□□ -0.21
NEK4-202ENST00000383721 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
NEK4-202ENST00000383721 ABI1Q8IZP0 508 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 FBXO39Q8N4B4 442 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 FAM47BQ8NA70 645 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 STAG3L4Q8TBR4 150 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■□□□ 13.1
NEK4-202ENST00000383721 AGPAT4Q9NRZ5 378 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 RIMKLBQ9ULI2 386 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 RNF112Q9ULX5 631 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
NEK4-202ENST00000383721 A0A0D9SEW6 157 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 PDLIM1O00151 329 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 HNRNPRO43390 633 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 ECI2O75521 394 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 NDST3O95803 873 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 SERPINF2P08697 491 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 PRDX3P30048 256 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 OXTRP30559 389 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 FMO4P31512 558 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 MAPKAPK2P49137 400 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 BNIP2Q12982 314 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 RPS6KA2Q15349 733 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 COLGALT2Q8IYK4 626 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 MFSD2AQ8NA29 543 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 TEX37Q96LM6 180 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 DERL2Q9GZP9 239 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 INTS10Q9NVR2 710 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 GID8Q9NWU2 228 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 ACTR3BQ9P1U1 418 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 PCDHA9Q9Y5H5 950 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 CDC7O00311 574 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 ARPC2O15144 300 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 TPST1O60507 370 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 TMCC1O94876 653 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 GNAO1P09471 354 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 IDO1P14902 403 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 MAGEA11P43364 429 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 ZNF140P52738 457 aaPredicted RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 CDH15P55291 814 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 INPP5AQ14642 412 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 INTS11Q5TA45 600 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 CFAP52Q8N1V2 620 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 TRIM15Q9C019 465 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 SYTL2Q9HCH5 934 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 NLE1Q9NVX2 485 aaPredicted RBP13.75□□□□□ -0.21
NEK4-202ENST00000383721 SMOXQ9NWM0 555 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 SLC27A5Q9Y2P5 690 aa13.75□□□□□ -0.21
NEK4-202ENST00000383721 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 ASPDHA6ND91 283 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 TRMUO75648 421 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 GJB5O95377 273 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 RPS17P08708 135 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 PRR35P0CG20 571 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 MYOGP15173 224 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 ZFP36L2P47974 494 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 COQ5Q5HYK3 327 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 ANKS6Q68DC2 871 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 ALG1LQ6GMV1 187 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 OGFOD2Q6N063 350 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 CMTR2Q8IYT2 770 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 PACRGLQ8N7B6 248 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 HM13Q8TCT9 377 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 EZH1Q92800 747 aaPredicted RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 FUBP1Q96AE4 644 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 TMEM125Q96AQ2 219 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 VPS33AQ96AX1 596 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 MYRFLQ96LU7 910 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 CLK4Q9HAZ1 481 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 TAS2R13Q9NYV9 303 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 GALPQ9UBC7 116 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 RSL24D1Q9UHA3 163 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 TACR2P21452 398 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 IL10P22301 178 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 PSMA4P25789 261 aaKnown RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 RGRP47804 291 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 AGTR2P50052 363 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
NEK4-202ENST00000383721 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 CAMK1DQ8IU85 385 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 GOLM1Q8NBJ4 401 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 OR4K2Q8NGD2 314 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 B4GALNT2Q8NHY0 566 aa13.74□□□□□ -0.21
NEK4-202ENST00000383721 ZNF689Q96CS4 500 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms