RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SIDT2Q8NBJ9 832 aaKnown RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 BIRC7Q96CA5 298 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 CENPNQ96H22 339 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 MFSD1Q9H3U5 465 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 FANCEQ9HB96 536 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ZFYVE28Q9HCC9 887 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ATP13A1Q9HD20 1204 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ABCC13Q9NSE7 274 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 SLC38A7Q9NVC3 462 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 PCDH10Q9P2E7 1040 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 SLC27A5Q9Y2P5 690 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 GPR45Q9Y5Y3 372 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 TCRBV5S2A0A599 114 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 AP3B1O00203 1094 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 OR4F21O95013 312 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 UGT1A1P22309 533 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 UGT1A4P22310 534 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 UGT1A3P35503 534 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 UGT1A5P35504 534 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 INPP5AQ14642 412 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 AFMIDQ63HM1 303 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 NANOGP8Q6NSW7 305 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 SERINC5Q86VE9 423 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 FBXO39Q8N4B4 442 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 TRPV3Q8NET8 790 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 CALML6Q8TD86 181 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 CHID1Q9BWS9 393 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 NANOGQ9H9S0 305 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 SMURF2Q9HAU4 748 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 MRM3Q9HC36 420 aaKnown RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 SDR39U1Q9NRG7 319 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 ACTR3BQ9P1U1 418 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 PRG3Q9Y2Y8 225 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 FGF10O15520 208 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 HOXC13P31276 330 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 RFC2P35250 354 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 RPS9P46781 194 aaKnown RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 ACADVLP49748 655 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 HK3P52790 923 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 SLC14A2Q15849 920 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ZNF280BQ86YH2 543 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 PIANPQ8IYJ0 282 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ZNF683Q8IZ20 524 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 LRRC43Q8N309 656 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 DHRSXQ8N5I4 330 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 HM13Q8TCT9 377 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 ROPN1LQ96C74 230 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 RPRD1AQ96P16 312 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 IFT80Q9P2H3 777 aaPredicted RBP10.5□□□□□ -0.73
SMC3-201ENST00000361804 ZNF510Q9Y2H8 683 aa10.5□□□□□ -0.73
SMC3-201ENST00000361804 XYLBO75191 536 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 MAGEA10P43363 369 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 RENBPP51606 427 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 FKBP1BP68106 108 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 LAPTM4AQ15012 233 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 TIGD7Q6NT04 549 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 PIWIL3Q7Z3Z3 882 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 TBC1D15Q8TC07 691 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 VWCEQ96DN2 955 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 DUS3LQ96G46 650 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 ACBD6Q9BR61 282 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 SEZ6LQ9BYH1 1024 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 ADNPQ9H2P0 1102 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 MRPL40Q9NQ50 206 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 ZNF106Q9H2Y7 1883 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 ZSCAN9O15535 394 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 SLC7A4O43246 635 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 RASAL1O95294 804 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 ZBTB11O95625 1053 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 B3GALT4O96024 378 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 CYBBP04839 570 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 ITGB6P18564 788 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 PRKACGP22612 351 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 FSHRP23945 695 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 DNAJB2P25686 324 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 SH3BGRP55822 239 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 ADRM1Q16186 407 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 LCN8Q6JVE9 175 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 ZNF598Q86UK7 904 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 DCP1BQ8IZD4 617 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 FNDC5Q8NAU1 212 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 OR7D4Q8NG98 312 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 OR4K2Q8NGD2 314 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 PARK7Q99497 189 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 TDRD1Q9BXT4 1180 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 SMPD3Q9NY59 655 aaPredicted RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 INVSQ9Y283 1065 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 CNPP09543 421 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 POLD2P49005 469 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 TBX4P57082 545 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 FSCN1Q16658 493 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 MRPL10Q7Z7H8 261 aaKnown RBP10.49□□□□□ -0.73
SMC3-201ENST00000361804 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 MINDY1Q8N5J2 469 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 MFSD2AQ8NA29 543 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 FBXO30Q8TB52 745 aa10.49□□□□□ -0.73
SMC3-201ENST00000361804 CSF3RQ99062 836 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms