RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 RNASEH1O60930 286 aaKnown RBP22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 NDUFS3O75489 264 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 SLC4A1P02730 911 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 CA8P35219 290 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 PLK1P53350 603 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 GRIK2Q13002 908 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 ZNF783Q6ZMS7 281 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 SPATA24Q86W54 205 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 SMRP1Q8NCR6 262 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 PBXIP1Q96AQ6 731 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 PTERQ96BW5 349 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 NUSAP1Q9BXS6 441 aaKnown RBP22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 TRIM15Q9C019 465 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 NACA2Q9H009 215 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 CCSER2Q9H7U1 834 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 TMEM45AQ9NWC5 275 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 HSFX1Q9UBD0 423 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 PLXNA4Q9HCM2 1894 aa22.36■■□□□ 1.17
NKX6-3-202ENST00000524115 STX16-NPEPL1H3BU86 382 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 STX16O14662 325 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 RHOBTB1O94844 696 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 MRPL19P49406 292 aaKnown RBP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 MS4A2Q01362 244 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 MAP7D1Q3KQU3 841 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 UGT3A2Q3SY77 523 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 PABPC1LQ4VXU2 614 aaKnown RBP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 AARS2Q5JTZ9 985 aaKnown RBP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 KANK2Q63ZY3 851 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 LDB1Q86U70 411 aaPredicted RBP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 CIR1Q86X95 450 aaPredicted RBP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 TICAM1Q8IUC6 712 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 HOMEZQ8IX15 550 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 GJD3Q8N144 294 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 ATOH8Q96SQ7 321 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 CCT7Q99832 543 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 ADGRE3Q9BY15 652 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 SCUBE2Q9NQ36 999 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 IRAK3Q9Y616 596 aa22.35■■□□□ 1.17
NKX6-3-202ENST00000524115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 OR51F1A6NGY5 319 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 GOLGA8CPA6NN73 597 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 MUSKO15146 869 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 CLASP2O75122 1294 aaKnown RBP22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 SOAT2O75908 522 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 GFAPP14136 432 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 DPP6P42658 865 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 RHDQ02161 417 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 DUSP4Q13115 394 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 ZNF177Q13360 481 aaPredicted RBP22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 GALNT3Q14435 633 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 HECTD3Q5T447 861 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 ANKS6Q68DC2 871 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 SPATA19Q7Z5L4 167 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 GOLM1Q8NBJ4 401 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 OR52K2Q8NGK3 314 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 PLK2Q9NYY3 685 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 CCDC167Q9P0B6 97 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 TMEM181Q9P2C4 612 aa22.34■■□□□ 1.17
NKX6-3-202ENST00000524115 ATG2AQ2TAZ0 1938 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 TXNDC9O14530 226 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 UBFD1O14562 309 aaKnown RBP22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 VPS26AO75436 327 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 MATN4O95460 622 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 RHOCP08134 193 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 ZCCHC18P0CG32 403 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 LBPP18428 481 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 TTPAP49638 278 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 FOXM1Q08050 763 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 LCP2Q13094 533 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 C8orf82Q6P1X6 216 aaPredicted RBP22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 GLT6D1Q7Z4J2 308 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 PIM3Q86V86 326 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 MIER2Q8N344 545 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 FBXO39Q8N4B4 442 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 OR13C4Q8NGS5 318 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 ZFAND2BQ8WV99 257 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 RMDN1Q96DB5 314 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 C1QTNF3Q9BXJ4 246 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 POLR3BQ9NW08 1133 aaPredicted RBP22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 GID8Q9NWU2 228 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 RNF112Q9ULX5 631 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 BACE2Q9Y5Z0 518 aa22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 ZFP37Q9Y6Q3 630 aaPredicted RBP22.33■■□□□ 1.17
NKX6-3-202ENST00000524115 SMIM31A0A1B0GVY4 71 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 TTC24A2A3L6 582 aaPredicted RBP22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 FBP2O00757 339 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 CDK14O94921 469 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 VNN2O95498 520 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 CR2P20023 1033 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 LPOP22079 712 aaPredicted RBP22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 KCNC1P48547 511 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 CLCN4P51793 760 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 TIAL1Q01085 375 aaKnown RBP eCLIP22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 ZP2Q05996 745 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 RNF220Q5VTB9 566 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 ANKRD54Q6NXT1 300 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 ADHFE1Q8IWW8 467 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 LPGAT1Q92604 370 aa22.33■■□□□ 1.16
NKX6-3-202ENST00000524115 EPB41L1Q9H4G0 881 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms