RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 INPP5DQ92835 1189 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZIM3Q96PE6 472 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 FERMT1Q9BQL6 677 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 NMUR1Q9HB89 426 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 SMPD4Q9NXE4 827 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CYTH4Q9UIA0 394 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 ZMYM5Q9UJ78 669 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 NOCTQ9UK39 431 aaKnown RBP11.56□□□□□ -0.56
BRCA1-222ENST00000493919 NUDT5Q9UKK9 219 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CCL26Q9Y258 94 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 USP3Q9Y6I4 520 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 CAPN6Q9Y6Q1 641 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 NCANO14594 1321 aa11.56□□□□□ -0.56
BRCA1-222ENST00000493919 HEPACAM2A8MVW5 462 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ANHXE9PGG2 379 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 KPNA4O00629 521 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 CDH16O75309 829 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 SERPINI2O75830 405 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 TRIM16O95361 564 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ARHGDIAP52565 204 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 AMPD2Q01433 879 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 PRKG2Q13237 762 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 C16orf72Q14CZ0 275 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ASIC2Q16515 512 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 SEZ6L2Q6UXD5 910 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 GSTA5Q7RTV2 222 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 KIAA2013Q8IYS2 634 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 CLEC4CQ8WTT0 213 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 RSPRY1Q96DX4 576 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 HSFY1Q96LI6 401 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF578Q96N58 590 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 SERPINB12Q96P63 405 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 C19orf43Q9BQ61 176 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 RBM38Q9H0Z9 239 aaKnown RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 PABPC3Q9H361 631 aaKnown RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 TIGARQ9NQ88 270 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 OSER1Q9NX31 292 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 TJP2Q9UDY2 1190 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 SORCS3Q9UPU3 1222 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 HELZP42694 1942 aaKnown RBP11.55□□□□□ -0.56
BRCA1-222ENST00000493919 MYO10Q9HD67 2058 aa11.55□□□□□ -0.56
BRCA1-222ENST00000493919 K7EPI3 171 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 GNB5O14775 395 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 COCHO43405 550 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 NARSO43776 548 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ECI2O75521 394 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RBBP9O75884 186 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DCTN3O75935 186 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 UBOX5O94941 541 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 OAS1P00973 400 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ZDHHC11BP0C7U3 371 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RARGP13631 454 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CDH5P33151 784 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RNF144AP50876 292 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DAOAP59103 153 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 YWHAGP61981 247 aaKnown RBP eCLIP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 IL1RL1Q01638 556 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CDR2Q01850 454 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TDGQ13569 410 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 FIGNQ5HY92 759 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SMYD5Q6GMV2 418 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 VITQ6UXI7 678 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 YAF2Q8IY57 180 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CLYBLQ8N0X4 340 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TMEM35BQ8NCS4 154 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RIN3Q8TB24 985 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DDX1Q92499 740 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.564e-9■■■□□ 15.2
BRCA1-222ENST00000493919 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CPXM1Q96SM3 734 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DDX23Q9BUQ8 820 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 PLA2G2FQ9BZM2 168 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 OR2B2Q9GZK3 357 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 MVB12BQ9H7P6 319 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ANKMY1Q9P2S6 941 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CD300AQ9UGN4 299 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ANGPTL2Q9UKU9 493 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SMG5Q9UPR3 1016 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CPQQ9Y646 472 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 PIAS3Q9Y6X2 628 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 EFCAB10A6NFE3 127 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 MDM4O15151 490 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SULT1C4O75897 302 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TBX18O95935 607 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 GYPCP04921 128 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ZCCHC18P0CG32 403 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 IRF1P10914 325 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DBTP11182 482 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RALAP11233 206 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CHN1P15882 459 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms