RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NFATC2Q13469 925 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 FGL2Q14314 439 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 TMED2Q15363 201 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 FASTKD1Q53R41 847 aaKnown RBP11.24□□□□□ -0.61
SND1-212ENST00000485871 LGSNQ5TDP6 509 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 ZDHHC20Q5W0Z9 365 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 KIAA1324Q6UXG2 1013 aaKnown RBP11.24□□□□□ -0.61
SND1-212ENST00000485871 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 TIFABQ6ZNK6 161 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 DGLUCYQ7Z3D6 616 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 NLRP8Q86W28 1048 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 CACNA2D3Q8IZS8 1091 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 TRAM1L1Q8N609 369 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 LPGAT1Q92604 370 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 CCDC97Q96F63 343 aaPredicted RBP11.24□□□□□ -0.61
SND1-212ENST00000485871 VPS39Q96JC1 886 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 TCF12Q99081 682 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 GPR22Q99680 433 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 OMDQ99983 421 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 FAM83DQ9H4H8 585 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 PREBQ9HCU5 417 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 FBXO6Q9NRD1 293 aaPredicted RBP11.24□□□□□ -0.61
SND1-212ENST00000485871 RAD18Q9NS91 495 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 SMOXQ9NWM0 555 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 TBK1Q9UHD2 729 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 CD84Q9UIB8 345 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 COQ6Q9Y2Z9 468 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
SND1-212ENST00000485871 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 A0A1W2PPM1 405 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MED19A0JLT2 244 aaPredicted RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 TRIM49D1C9J1S8 452 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ZWINTO95229 277 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 WISP3O95389 354 aaPredicted RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 ITGA2BP08514 1039 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 CREB1P16220 341 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 UGT1A6P19224 532 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ITGALP20701 1170 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 UGT1A1P22309 533 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 UGT1A4P22310 534 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ACSL1P33121 698 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 UGT1A3P35503 534 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 UGT1A5P35504 534 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 SEC24CP53992 1094 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MTAPQ13126 283 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 BMPR2Q13873 1038 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ITIH4Q14624 930 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ACOX1Q15067 660 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 DBN1Q16643 649 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 GPR33Q49SQ1 333 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ATP13A5Q4VNC0 1218 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ZRANB3Q5FWF4 1079 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 SEL1L3Q68CR1 1132 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MRNIPQ6NTE8 343 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 CERS6Q6ZMG9 384 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 SERPINA9Q86WD7 417 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 SRRM1Q8IYB3 904 aaKnown RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 NXPE1Q8N323 547 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MDM1Q8TC05 714 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ZNF398Q8TD17 642 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 CXorf40AQ8TE69 158 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 HMGB4Q8WW32 186 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 GRAMD1AQ96CP6 724 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 NUS1Q96E22 293 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MAGEB18Q96M61 343 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ZNF317Q96PQ6 595 aaPredicted RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 HHIPQ96QV1 700 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 IER2Q9BTL4 223 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 P2RY12Q9H244 342 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 ASB8Q9H765 288 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 INTS10Q9NVR2 710 aaKnown RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 FNDC3AQ9Y2H6 1198 aaKnown RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 MED16Q9Y2X0 877 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 MTO1Q9Y2Z2 717 aaKnown RBP11.23□□□□□ -0.61
SND1-212ENST00000485871 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
SND1-212ENST00000485871 IGLON5A6NGN9 336 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 K7ESF4 209 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TM9SF1O15321 606 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 PI15O43692 258 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 LRP4O75096 1905 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 RFPL1O75677 317 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 KRT37O76014 449 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TM7SF2O76062 418 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 DRD4P21917 467 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms