RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 EPB41L5Q9HCM4 733 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 ARFGAP3Q9NP61 516 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 BFARQ9NZS9 450 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-213ENST00000485530 SLC6A14Q9UN76 642 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
TRA2B-213ENST00000485530 TCAF1Q9Y4C2 921 aa12.15□□□□□ -0.46
TRA2B-213ENST00000485530 PCYT1BQ9Y5K3 369 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-213ENST00000485530 OAS3Q9Y6K5 1087 aaKnown RBP12.15□□□□□ -0.46
TRA2B-213ENST00000485530 CCDC162PA2VCL2 907 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 A6NNZ2 444 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 INPP4BO15327 924 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 CFIP05156 583 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 GNSP15586 552 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 ARNTP27540 789 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 GPR1P46091 355 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 DHX9Q08211 1270 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 SHBQ15464 509 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 ZNF542PQ5EBM4 170 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 ADAMTSL4Q6UY14 1074 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 IQCHQ86VS3 1027 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 PIANPQ8IYJ0 282 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 CEP76Q8TAP6 659 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 STYXQ8WUJ0 223 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 HDAC10Q969S8 669 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 CCDC97Q96F63 343 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 PLEKHG4BQ96PX9 1271 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 SPATA16Q9BXB7 569 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 C1QTNF7Q9BXJ2 289 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 IL22Q9GZX6 179 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 XAB2Q9HCS7 855 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 RIMKLBQ9ULI2 386 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 SOX13Q9UN79 622 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 TMEM98Q9Y2Y6 226 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
TRA2B-213ENST00000485530 PKP3Q9Y446 797 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 MAST4O15021 2626 aa12.14□□□□□ -0.47
TRA2B-213ENST00000485530 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 SPTY2D1-AS1A0A0U1RR47 76 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 AGAP14A8MT82 685 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 H7C0S8 307 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 AP3B1O00203 1094 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ARHGAP33O14559 1287 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 PPFIA2O75334 1257 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 CEACAM5P06731 702 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RHOXF2BP0C7M4 288 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TSHRP16473 764 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TEAD1P28347 426 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ECHS1P30084 290 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 SPAM1P38567 509 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RABIFP47224 123 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 PLTPP55058 493 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 YPEL5P62699 121 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 CDK3Q00526 305 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 GRIK2Q13002 908 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ZNF423Q2M1K9 1284 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 HLA-BQ31612 363 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RAET1GQ6H3X3 334 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 UNC5BQ8IZJ1 945 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TRAM1L1Q8N609 369 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 OR1E3Q8WZA6 343 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 C19orf43Q9BQ61 176 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 CDH19Q9H159 772 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TCEAL2Q9H3H9 227 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 MRPL40Q9NQ50 206 aaKnown RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 RRAGDQ9NQL2 400 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-213ENST00000485530 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 SUSD2Q9UGT4 822 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 MYLKQ15746 1914 aa12.13□□□□□ -0.47
TRA2B-213ENST00000485530 APC2O95996 2303 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 ZCWPW2A0A1B0GU75 182 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 E7ESA3 106 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms