RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 COQ10AQ96MF6 247 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 NAP1L5Q96NT1 182 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 OR2M4Q96R27 311 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 BARD1Q99728 777 aaKnown RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 TRIM5Q9C035 493 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 ATP13A3Q9H7F0 1226 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 PLCB1Q9NQ66 1216 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 C5AR2Q9P296 337 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 PLEKHM1Q9Y4G2 1056 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 COPG1Q9Y678 874 aaKnown RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 MTORP42345 2549 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 MN1Q10571 1320 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 A0A1B0GTL3 188 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 PLEKP08567 350 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-203ENST00000438862 ADRA1BP35368 520 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 PBX1P40424 430 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 USP8P40818 1118 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 MAPK9P45984 424 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 NFATC2Q13469 925 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 FIGNQ5HY92 759 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 FAM102AQ5T9C2 384 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-203ENST00000438862 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 PAF1Q8N7H5 531 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 AVL9Q8NBF6 648 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 ST6GALNAC3Q8NDV1 305 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 ECHDC3Q96DC8 303 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 C18orf8Q96DM3 657 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 TBC1D31Q96DN5 1066 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 FCRL4Q96PJ5 515 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 SMAD5Q99717 465 aaKnown RBP11.04□□□□□ -0.64
CSTF3-203ENST00000438862 NUDT9Q9BW91 350 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 XPO4Q9C0E2 1151 aaKnown RBP11.04□□□□□ -0.64
CSTF3-203ENST00000438862 GPR83Q9NYM4 423 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 B3GNT3Q9Y2A9 372 aa11.04□□□□□ -0.64
CSTF3-203ENST00000438862 PES1O00541 588 aaKnown RBP11.03□□□□□ -0.64
CSTF3-203ENST00000438862 LRIG2O94898 1065 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 VSIG8P0DPA2 414 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 SLC2A4P14672 509 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 CDC25BP30305 580 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 FLT3P36888 993 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 PTGIRP43119 386 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 GABRB2P47870 512 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 PTK2Q05397 1052 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 BCL2L1Q07817 233 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 TESK1Q15569 626 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 PYCR3Q53H96 274 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 IYDQ6PHW0 289 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 ARCQ7LC44 396 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 SRLQ86TD4 932 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 GLIS1Q8NBF1 620 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 ANP32BQ92688 251 aaKnown RBP11.03□□□□□ -0.64
CSTF3-203ENST00000438862 RNF31Q96EP0 1072 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 LATS2Q9NRM7 1088 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 AGPAT4Q9NRZ5 378 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 UBA2Q9UBT2 640 aaPredicted RBP11.03□□□□□ -0.64
CSTF3-203ENST00000438862 FARSAQ9Y285 508 aaKnown RBP11.03□□□□□ -0.64
CSTF3-203ENST00000438862 SIK3Q9Y2K2 1263 aa11.03□□□□□ -0.64
CSTF3-203ENST00000438862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.03□□□□□ -0.647e-13■□□□□ 10.1
CSTF3-203ENST00000438862 KIR2DS5A0A0G2JLQ3 304 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 A0A0G2JNG1 304 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 OR5K4A6NMS3 321 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 A8MX80 341 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 CFAP99D6REC4 459 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 KIR2DS3K7RE56 304 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 ZNF185O15231 689 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 ZG16O60844 167 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 TMEM63AO94886 807 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 PON1P27169 355 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 SEPHS1P49903 392 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 ZNF75DP51815 510 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 PDE1BQ01064 536 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 ART3Q13508 389 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 TRIM14Q14142 442 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 KIR2DS5Q14953 304 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 PARP15Q460N3 678 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 CRB2Q5IJ48 1285 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 MED25Q71SY5 747 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 BPHLQ86WA6 291 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-203ENST00000438862 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 TMEM102Q8N9M5 508 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-203ENST00000438862 UBE2Q2Q8WVN8 375 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 ELMO2Q96JJ3 720 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 HERPUD2Q9BSE4 406 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 NOL6Q9H6R4 1146 aaKnown RBP11.02□□□□□ -0.65
CSTF3-203ENST00000438862 PDE7BQ9NP56 450 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 COPG2Q9UBF2 871 aa11.02□□□□□ -0.65
CSTF3-203ENST00000438862 CNOT8Q9UFF9 292 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms