RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FNBP1LQ5T0N5 605 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 TPGS2Q68CL5 300 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ZYG11AQ6WRX3 759 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF540Q8NDQ6 660 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF354BQ96LW1 612 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 CCDC177Q9NQR7 707 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PRAMEF1O95521 474 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PKMP14618 531 aaKnown RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 BMP6P22004 513 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 TAF1AQ15573 450 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PPP2R2DQ66LE6 453 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 FAM98AQ8NCA5 519 aaKnown RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 LCA5LO95447 670 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 C22orf31O95567 290 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 LDOC1O95751 146 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 CERCAMQ5T4B2 595 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 GPR88Q9GZN0 384 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 CDKN2BP42772 138 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 GNPDA1P46926 289 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 BLKP51451 505 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 POLR2JP52435 117 aaKnown RBP15.77■□□□□ 0.12
PTPN13-204ENST00000436978 STXBP1P61764 594 aaKnown RBP15.77■□□□□ 0.12
PTPN13-204ENST00000436978 RPP38P78345 283 aaKnown RBP15.77■□□□□ 0.12
PTPN13-204ENST00000436978 B3GNT6Q6ZMB0 384 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 OTOP2Q7RTS6 562 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 UBASH3BQ8TF42 649 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 GTF2IRD1Q9UHL9 959 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 SNPHO15079 494 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 IRAK2O43187 625 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 UROSP10746 265 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 AKT2P31751 481 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 TBC1D21Q8IYX1 336 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 BPIFB6Q8NFQ5 453 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 WFIKKN2Q8TEU8 576 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 FUBP3Q96I24 572 aaKnown RBP eCLIP15.77■□□□□ 0.12
PTPN13-204ENST00000436978 PNPLA3Q9NST1 481 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 ASB3Q9Y575 518 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 USP46P62068 366 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 PRR5P85299 388 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 LPIN1Q14693 890 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 SLC30A8Q8IWU4 369 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF180Q9UJW8 692 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 INHAP05111 366 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 RAB11FIP5Q9BXF6 653 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 LRMDAQ9H2I8 198 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 FZD10Q9ULW2 581 aa15.77■□□□□ 0.12
PTPN13-204ENST00000436978 OLR1P78380 273 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 XIAPP98170 497 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 KLHL5Q96PQ7 755 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 EHD3Q9NZN3 535 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 TCAF1Q9Y4C2 921 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 TOPAZ1Q8N9V7 1692 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 PHRF1Q9P1Y6 1649 aaKnown RBP15.77■□□□□ 0.11
PTPN13-204ENST00000436978 A0A0J9YYE9 177 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 CAP1Q01518 475 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 FPGSQ05932 587 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 ITGADQ13349 1161 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 GTF2H2Q13888 395 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 ATXN7L2Q5T6C5 722 aaPredicted RBP15.77■□□□□ 0.11
PTPN13-204ENST00000436978 GTF2H2CQ6P1K8 395 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 TSPAN14Q8NG11 270 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 SH3GLB1Q9Y371 365 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 STK16O75716 305 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 CAPGP40121 348 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 USP4Q13107 963 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 MED27Q6P2C8 311 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 SPATA6LQ8N4H0 392 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 HMCESQ96FZ2 354 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 SEC14L3Q9UDX4 400 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 SSR3Q9UNL2 185 aa15.77■□□□□ 0.11
PTPN13-204ENST00000436978 MAP2K7O14733 419 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 EPHB6O15197 1021 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 EPHA3P29320 983 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 KLHL12Q53G59 568 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 ZNF697Q5TEC3 545 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 SULT1C3Q6IMI6 304 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 UBR7Q8N806 425 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 C1orf127Q8N9H9 656 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 XKRYO14609 159 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 CHRNGP07510 517 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 BPGMP07738 259 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 HSD17B2P37059 387 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 NDUFA5Q16718 116 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 SNAP47Q5SQN1 464 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 TCF12Q99081 682 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 PTGFRNQ9P2B2 879 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 TLR6Q9Y2C9 796 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 CHST10O43529 356 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 SLC35G6P0C7Q6 338 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 ELF3P78545 371 aaPredicted RBP15.76■□□□□ 0.11
PTPN13-204ENST00000436978 GCNT6Q5T4J0 391 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 PTCHD4Q6ZW05 846 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 PLD5Q8N7P1 536 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 RAD51AP1Q96B01 352 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 STBD1O95210 358 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 TAF8Q7Z7C8 310 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 CFAP206Q8IYR0 622 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms