RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 H7C0C1 242 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 CES2O00748 559 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 ZNF185O15231 689 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 TRIM23P36406 574 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
LSM2-208ENST00000375661 ATP5OP48047 213 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 SCNN1BP51168 640 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.47
LSM2-208ENST00000375661 PEX6Q13608 980 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 UBAP2LQ14157 1087 aaKnown RBP12.11□□□□□ -0.47
LSM2-208ENST00000375661 IHHQ14623 411 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 C16orf72Q14CZ0 275 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 TMPRSS9Q7Z410 1059 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 SRLQ86TD4 932 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 C17orf82Q86X59 251 aaPredicted RBP12.11□□□□□ -0.47
LSM2-208ENST00000375661 BBS5Q8N3I7 341 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 NKD1Q969G9 470 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 DPYSL5Q9BPU6 564 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 CEP41Q9BYV8 373 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 FGF22Q9HCT0 170 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 SMARCAL1Q9NZC9 954 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 ANAPC2Q9UJX6 822 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 LIASO43766 372 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 TCP1P17987 556 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 GPR3P46089 330 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 POLR2LP62875 67 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 CYP4F2P78329 520 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 KCTD16Q68DU8 428 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 ALG1LQ6GMV1 187 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 SYT10Q6XYQ8 523 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 CDKL3Q8IVW4 592 aaPredicted RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 PLA2G15Q8NCC3 412 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 ARRDC2Q8TBH0 407 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 ACTRT1Q8TDG2 376 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 ECHDC3Q96DC8 303 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 TEKT5Q96M29 485 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 NUDCD1Q96RS6 583 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 TMEM168Q9H0V1 697 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 NOD2Q9HC29 1040 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 MRPL40Q9NQ50 206 aaKnown RBP12.1□□□□□ -0.47
LSM2-208ENST00000375661 KCTD5Q9NXV2 234 aa12.1□□□□□ -0.47
LSM2-208ENST00000375661 PRSS38A1L453 326 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 RHPN2P1A8MT19 583 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 B4GAT1O43505 415 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 RECQL5O94762 991 aaPredicted RBP12.09□□□□□ -0.47
LSM2-208ENST00000375661 ELFN1P0C7U0 828 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 SERPINA4P29622 427 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 CD68P34810 354 aaPredicted RBP12.09□□□□□ -0.47
LSM2-208ENST00000375661 CCR10P46092 362 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 LIMK2P53671 638 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 POLE2P56282 527 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 AP1S1P61966 158 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 DSC2Q02487 901 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 ITKQ08881 620 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 RALGDSQ12967 914 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 KCNAB2Q13303 367 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 SQSTM1Q13501 440 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 CCNG2Q16589 344 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 LIPIQ6XZB0 460 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 DPPA4Q7L190 304 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 CAMK1DQ8IU85 385 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 ZNF567Q8N184 647 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 PRELID2Q8N945 189 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 MAIP1Q8WWC4 291 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 C16orf45Q96MC5 204 aaPredicted RBP12.09□□□□□ -0.47
LSM2-208ENST00000375661 AGAP3Q96P47 875 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 GSDMCQ9BYG8 508 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
LSM2-208ENST00000375661 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
LSM2-208ENST00000375661 WDR26Q9H7D7 661 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 ATP13A3Q9H7F0 1226 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 CYP4F12Q9HCS2 524 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
LSM2-208ENST00000375661 IGHV5-10-1A0A0J9YXX1 117 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CLEC18AA5D8T8 446 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ZNF891A8MT65 544 aaPredicted RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 PGRMC1O00264 195 aaKnown RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 TRAFD1O14545 582 aaPredicted RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 KCNN4O15554 427 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 MTSS1O43312 755 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms