RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZBTB22O15209 634 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 CYP4B1P13584 511 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 ACAP2Q15057 778 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 TEX44Q53QW1 395 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 C12orf56Q8IXR9 622 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 CCDC177Q9NQR7 707 aaPredicted RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 HCN3Q9P1Z3 774 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 FSCN2O14926 492 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 B4GALT4O60513 344 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SLC5A3P53794 718 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 DRG2P55039 364 aaKnown RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 TSC22D1Q15714 1073 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 KCTD21Q4G0X4 260 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 CERCAMQ5T4B2 595 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 MED27Q6P2C8 311 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 CADM2Q8N3J6 435 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 PLD4Q96BZ4 506 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SPATA9Q9BWV2 254 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 COPS7AQ9UBW8 275 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 MST1RQ04912 1400 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 NDST3O95803 873 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SLC35G6P0C7Q6 338 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 LCLAT1Q6UWP7 414 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 FAM129CQ86XR2 697 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 KCTD15Q96SI1 283 aaPredicted RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 MIOSQ9NXC5 875 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 BTN3A3O00478 584 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 CASKO14936 926 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 LYPLA2O95372 231 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 PTPN2P17706 415 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 AVPR1BP47901 424 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SMU1Q2TAY7 513 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 PRELID2Q8N945 189 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 PSMA8Q8TAA3 256 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 UPF1Q92900 1129 aaKnown RBP eCLIP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 POLMQ9NP87 494 aaPredicted RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 C8orf4Q9NR00 106 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 ROBO3Q96MS0 1386 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 LRRC10BA6NIK2 292 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 ALOX15BO15296 676 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 LYPLA1O75608 230 aaPredicted RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 FSBPO95073 299 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 STBD1O95210 358 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 IL12BP29460 328 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 WASP42768 502 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 STXBP1P61764 594 aaKnown RBP22.97■■□□□ 1.27
NPAS3-201ENST00000346562 PUDPQ08623 228 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 TBC1D21Q8IYX1 336 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SLC9A6Q92581 669 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 APOLD1Q96LR9 279 aa22.97■■□□□ 1.27
NPAS3-201ENST00000346562 SMIM28A0A1B0GU29 152 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 SRRM3A6NNA2 597 aaPredicted RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 GMFGO60234 142 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 LAMP2P13473 410 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 DNASE1L1P49184 302 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 POLR2JP52435 117 aaKnown RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 SEC13P55735 322 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 SP2Q02086 613 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 ITGB3BPQ13352 177 aaPredicted RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 CBFBQ13951 182 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 DPYSQ14117 519 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 TNKS2Q9H2K2 1166 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 SMURF2Q9HAU4 748 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 GPN1Q9HCN4 374 aaPredicted RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 PLK2Q9NYY3 685 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 CTSKP43235 329 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 MUC13Q9H3R2 512 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 RIIAD1A6NNX1 92 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 ARHGEF33A8MVX0 844 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 ELNP15502 786 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 C2orf80Q0P641 193 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 NOMO1Q15155 1222 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 TIGD2Q4W5G0 525 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 XYLT1Q86Y38 959 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 NPAS4Q8IUM7 802 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 C2orf73Q8N5S3 287 aaPredicted RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 MAF1Q9H063 256 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 A0A1W2PQ72 361 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 NUDT17P0C025 328 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 UROSP10746 265 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 KIR3DL1P43629 444 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 VBP1P61758 197 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 MREGQ8N565 214 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 BHLHE41Q9C0J9 482 aaPredicted RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 GBA3Q9H227 469 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 RSL24D1Q9UHA3 163 aaKnown RBP22.96■■□□□ 1.27
NPAS3-201ENST00000346562 KLF15Q9UIH9 416 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 KIF20BQ96Q89 1820 aa22.96■■□□□ 1.27
NPAS3-201ENST00000346562 ATP6AP2A0A1C7CYW4 349 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 ATP6AP2O75787 350 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 FABP3P05413 133 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 CCNCP24863 283 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 DMPKQ09013 629 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 AAGABQ6PD74 315 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 SLC34A3Q8N130 599 aa22.95■■□□□ 1.27
NPAS3-201ENST00000346562 ZFP37Q9Y6Q3 630 aaPredicted RBP22.95■■□□□ 1.27
NPAS3-201ENST00000346562 IL12AP29459 219 aa22.95■■□□□ 1.26
NPAS3-201ENST00000346562 ADRA1BP35368 520 aa22.95■■□□□ 1.26
NPAS3-201ENST00000346562 CAP1Q01518 475 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms