RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 DHRS12A0PJE2 317 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 E9PAM4 449 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PPP1R26Q5T8A7 1209 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 YTHDF3Q7Z739 585 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 BHLHE22Q8NFJ8 381 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 ADAMTS15Q8TE58 950 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 MTMR8Q96EF0 704 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 AARSD1Q9BTE6 412 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 RHBGQ9H310 441 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 ITM2CQ9NQX7 267 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SCN2AQ99250 2005 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SAGE2PA6NJ88 616 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 H0Y858 1186 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 OR10H3O60404 316 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 STK16O75716 305 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 UROSP10746 265 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 LAMP2P13473 410 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 IL10RBQ08334 325 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 DNAJC14Q6Y2X3 702 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 TAF8Q7Z7C8 310 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 TMPRSS11BQ86T26 416 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 CLIP3Q96DZ5 547 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 L1CAMP32004 1257 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PKNOX1P55347 436 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 CKAP2Q8WWK9 683 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PSKH2Q96QS6 385 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 CRHR1P34998 444 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 IDH2P48735 452 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 TAF10Q12962 218 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 C15orf59Q2T9L4 293 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 BLOC1S4Q9NUP1 217 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PTPRZ1P23471 2315 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 FAM237BA0A1B0GVD1 139 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SLC22A2O15244 555 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 AP2A1O95782 977 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 TRBC1P01850 177 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 GNAZP19086 355 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PPP3CAQ08209 521 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PTP4A2Q12974 167 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 TCEAL6Q6IPX3 200 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 BRAT1Q6PJG6 821 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 SLC26A9Q7LBE3 791 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 WDR12Q9GZL7 423 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 TRIM3O75382 744 aaPredicted RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 WFS1O76024 890 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 TM7SF2O76062 418 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 RASGRP1O95267 797 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 PROCP04070 461 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 COL6A1P12109 1028 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 ITPKBP27987 946 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 GNPDA1P46926 289 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 EOGTQ5NDL2 527 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 LBX2Q6XYB7 198 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 AENQ8WTP8 325 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
FN1-202ENST00000336916 ZNF304Q9HCX3 659 aa12.2□□□□□ -0.46
FN1-202ENST00000336916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
FN1-202ENST00000336916 PTGES3LE9PB15 166 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 CALCAP01258 141 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 ALDH4A1P30038 563 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 TBX2Q13207 712 aaPredicted RBP12.19□□□□□ -0.46
FN1-202ENST00000336916 BMPR2Q13873 1038 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 NAIF1Q69YI7 327 aaPredicted RBP12.19□□□□□ -0.46
FN1-202ENST00000336916 OR14C36Q8NHC7 312 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 LRTM1Q9HBL6 345 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 H3BNX3 289 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 EPHX1P07099 455 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 AGXTP21549 392 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 QKIQ96PU8 341 aaKnown RBP eCLIP12.19□□□□□ -0.467e-9■■□□□ 13.3
FN1-202ENST00000336916 RTKNQ9BST9 563 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 PLEKHA1Q9HB21 404 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 GLOD4Q9HC38 313 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 AKAP8O43823 692 aaKnown RBP12.19□□□□□ -0.46
FN1-202ENST00000336916 RSL1D1O76021 490 aaKnown RBP12.19□□□□□ -0.46
FN1-202ENST00000336916 MATN4O95460 622 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 NUDT17P0C025 328 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 TFPIP10646 304 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 IL12AP29459 219 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 KIR3DL1P43629 444 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 MED27Q6P2C8 311 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 HNRNPH3P31942 346 aaKnown RBP12.19□□□□□ -0.46
FN1-202ENST00000336916 PTGER3P43115 390 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 PSMD8P48556 350 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 C9orf64Q5T6V5 341 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 PSMA8Q8TAA3 256 aa12.19□□□□□ -0.46
FN1-202ENST00000336916 SNIP1Q8TAD8 396 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms