RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 TRAF6Q9Y4K3 522 aa20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 TCRBV9S1A1TA0A576 114 aa20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 NDST2P52849 883 aa20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 PTGES3Q15185 160 aaKnown RBP20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 CLHC1Q8NHS4 586 aa20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 VANGL1Q8TAA9 524 aaPredicted RBP20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 RHBDL2Q9NX52 303 aa20.63■□□□□ 0.89
SH3RF3-201ENST00000309415 ASMTP46597 345 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 LILRA4P59901 499 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 C2orf80Q0P641 193 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 SUZ12Q15022 739 aaKnown RBP20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 MED27Q6P2C8 311 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 CDH19Q9H159 772 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 LRTM1Q9HBL6 345 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 MIOSQ9NXC5 875 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 OR1F1O43749 312 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 ASLP04424 464 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 EPHA3P29320 983 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 AUHQ13825 339 aaKnown RBP20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 BEND5Q7L4P6 421 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 TAC4Q86UU9 113 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 GAL3ST4Q96RP7 486 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 CIDEBQ9UHD4 219 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 STK16O75716 305 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 HMG20AQ9NP66 347 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 RAB21Q9UL25 225 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 MRPS7Q9Y2R9 242 aaKnown RBP20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 ARVCFO00192 962 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 CST3P01034 146 aaPredicted RBP20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 GNPDA1P46926 289 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 HIPK1Q86Z02 1210 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 CADM2Q8N3J6 435 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 ZNF540Q8NDQ6 660 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 ZCCHC10Q8TBK6 192 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 SHDQ96IW2 340 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 TSSK3Q96PN8 268 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 TRMOQ9BU70 441 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 TAPBPLQ9BX59 468 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 INSL6Q9Y581 213 aa20.62■□□□□ 0.89
SH3RF3-201ENST00000309415 TM7SF2O76062 418 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 CLDN9O95484 217 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 IL12BP29460 328 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ATXN7L2Q5T6C5 722 aaPredicted RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TPGS2Q68CL5 300 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 CMC1Q7Z7K0 106 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 EXOSC8Q96B26 276 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 KREMEN1Q96MU8 473 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 GPR21Q99679 349 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ABCB8Q9NUT2 735 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 NUDT4Q9NZJ9 180 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 EHD3Q9NZN3 535 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 MMP8P22894 467 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 STXBP1P61764 594 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TLE2Q04725 743 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TMEM220Q6QAJ8 160 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 RBM18Q96H35 190 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 FAM124BQ9H5Z6 455 aaPredicted RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ERVK-11Q9UQG0 969 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 PCDHGC4Q9Y5F7 938 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 FAM86C2PA6NEL3 165 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 RPIAP49247 311 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 FAM91A1Q658Y4 838 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 HMGB4Q8WW32 186 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 DHX33Q9H6R0 707 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 SEC14L3Q9UDX4 400 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ASB3Q9Y575 518 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 IQCF5A8MTL0 148 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TPSB2P20231 275 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TPSAB1Q15661 275 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ATG10Q9H0Y0 220 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 IQCMA0A1B0GVH7 501 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TRAFD1O14545 582 aaPredicted RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 CCL5P13501 91 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 SRP54P61011 504 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 UBAP2LQ14157 1087 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 ESRP1Q6NXG1 681 aaKnown RBP20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 TRPV3Q8NET8 790 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 FBXW2Q9UKT8 454 aa20.61■□□□□ 0.89
SH3RF3-201ENST00000309415 FAM237AA0A1B0GTK4 181 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 SNHG28P0DPA3 235 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 DLG2Q15700 870 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 DUPD1Q68J44 220 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 SLC26A9Q7LBE3 791 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 NET1Q7Z628 596 aaPredicted RBP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 GALNT7Q86SF2 657 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 DHDDSQ86SQ9 333 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 ATCAYQ86WG3 371 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 TSEN2Q8NCE0 465 aaKnown RBP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 XAGE5Q8WWM1 108 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 RPL10LQ96L21 214 aaKnown RBP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 DHX15O43143 795 aaKnown RBP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 PSMG1O95456 288 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 TNFRSF8P28908 595 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 ZNF280AP59817 542 aaPredicted RBP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 MZT2BQ6NZ67 158 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 KLK6Q92876 244 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 PWWP2AQ96N64 755 aa20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 QKIQ96PU8 341 aaKnown RBP eCLIP20.6■□□□□ 0.89
SH3RF3-201ENST00000309415 SLC25A51Q9H1U9 297 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms