RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZNF669Q96BR6 464 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 OTUD5Q96G74 571 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CENPNQ96H22 339 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 C8orf48Q96LL4 319 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ASB2Q96Q27 587 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 UNKQ9C0B0 810 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 GABARAPL1Q9H0R8 117 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 IKZF5Q9H5V7 419 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NGRNQ9NPE2 291 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 MRPL40Q9NQ50 206 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 IARS2Q9NSE4 1012 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 INTS10Q9NVR2 710 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 TMEM248Q9NWD8 314 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SCML2Q9UQR0 700 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FADS3Q9Y5Q0 445 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HEATR9A2RTY3 570 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FAM149AA5PLN7 773 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TRIM43BA6NCK2 446 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 YJEFN3A6XGL0 299 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BBIP1A8MTZ0 92 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NPIPB8E9PQR5 432 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 KCNK1O00180 336 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PDHXO00330 501 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SLC22A1O15245 554 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 OAZ2O95190 189 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SNRPB2P08579 225 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 RPS17P08708 135 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 BMP8BP34820 402 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PXNP49023 591 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 CPT1AP50416 773 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HK3P52790 923 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GABARAPL2P60520 117 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 OSTNP61366 133 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 DSC1Q08554 894 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CAMK2BQ13554 666 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SMAD1Q15797 465 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 SEPT7Q16181 437 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 SMU1Q2TAY7 513 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TIGD7Q6NT04 549 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 PRR23BQ6ZRT6 265 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 DSG4Q86SJ6 1040 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FAM131BQ86XD5 332 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HOMEZQ8IX15 550 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 LGI2Q8N0V4 545 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 OR6J1Q8NGC5 347 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CEP70Q8NHQ1 597 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SPATA22Q8NHS9 363 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 LRRC58Q96CX6 371 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TRIB3Q96RU7 358 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CGREF1Q99674 301 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 OSBPL10Q9BXB5 764 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HOXD1Q9GZZ0 328 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 RNF39Q9H2S5 420 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SNX25Q9H3E2 840 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MFSD1Q9H3U5 465 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 POMKQ9H5K3 350 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 POLG2Q9UHN1 485 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PCDHGA8Q9Y5G5 932 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 A0A087WXM4 84 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 J3QRK9 145 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GFRA2O00451 464 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 EI24O14681 340 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ANXA9O76027 345 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CLPXO76031 633 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 IPO13O94829 963 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 HSPA4LO95757 839 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NPPAP01160 153 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 COL6A1P12109 1028 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BMP4P12644 408 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ENO3P13929 434 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 ITIH1P19827 911 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HTR1EP28566 365 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ETV6P41212 452 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 YAP1P46937 504 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 ARSDP51689 593 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SLC7A2P52569 658 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ATXN3P54252 364 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 MAP2K5Q13163 448 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CTBP1Q13363 440 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 RAP1GAP2Q684P5 730 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TMEM53Q6P2H8 277 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TXNDC11Q6PKC3 985 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SLC2A7Q6PXP3 512 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PIWIL3Q7Z3Z3 882 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 SPPL2CQ8IUH8 684 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CILP2Q8IUL8 1156 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CPA6Q8N4T0 437 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 C3orf58Q8NDZ4 430 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PROKR1Q8TCW9 393 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 AGR3Q8TD06 166 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FBXL8Q96CD0 374 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PCED1BQ96HM7 432 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SUSD3Q96L08 255 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PPP1R36Q96LQ0 422 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ZNF599Q96NL3 588 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MUS81Q96NY9 551 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NSUN5Q96P11 429 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 SERPINI1Q99574 410 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms