RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 VN1R2Q8NFZ6 395 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 AGR3Q8TD06 166 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 CYB5D2Q8WUJ1 264 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 EXT2Q93063 718 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 KLHL29Q96CT2 875 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 RSPRY1Q96DX4 576 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 UBXN10Q96LJ8 280 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-206ENST00000588860 EBF4Q9BQW3 602 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 APOL5Q9BWW9 433 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 DRC3Q9H069 523 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 LMAN2LQ9H0V9 348 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 RASSF4Q9H2L5 321 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 STN1Q9H668 368 aaKnown RBP8.72□□□□□ -1.01
SMAD4-206ENST00000588860 ALG9Q9H6U8 611 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 ZFYVE1Q9HBF4 777 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 CYP4F12Q9HCS2 524 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 SLC40A1Q9NP59 571 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 SAR1AQ9NR31 198 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 ARL8BQ9NVJ2 186 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 DZANK1Q9NVP4 752 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 SLCO3A1Q9UIG8 710 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 MSRAQ9UJ68 235 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
SMAD4-206ENST00000588860 HAO1Q9UJM8 370 aa8.72□□□□□ -1.01
SMAD4-206ENST00000588860 NEMP2A6NFY4 417 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 NPIPB15A6NHN6 443 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 A8MT66 165 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TRIM24O15164 1050 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GPR39O43194 453 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ZBTB14O43829 449 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 OR1I1O60431 355 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CCDC22O60826 627 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 DIAPH2O60879 1101 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SMIM24O75264 130 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 NIPSNAP2O75323 286 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 UNC5CO95185 931 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CLDN7O95471 211 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PRAMEF1O95521 474 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 POP4O95707 220 aaKnown RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 UGT2B4P06133 528 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PYGLP06737 847 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CHRNGP07510 517 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PKMP14618 531 aaKnown RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ARSAP15289 507 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 NQO1P15559 274 aaKnown RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CD1DP15813 335 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ZNF37AP17032 561 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ITGALP20701 1170 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 HMGCLP35914 325 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SPAM1P38567 509 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 DGKGP49619 791 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 IDH3AP50213 366 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 KCNJ2P63252 427 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SEMG2Q02383 582 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PRKAA1Q13131 559 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 KRT72Q14CN4 511 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GEN1Q17RS7 908 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 EML3Q32P44 896 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ARL13AQ5H913 290 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 FAM78AQ5JUQ0 283 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CTSL3PQ5NE16 218 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PPP2R2DQ66LE6 453 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TMEM215Q68D42 235 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GDPD4Q6W3E5 623 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TRIM67Q6ZTA4 783 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 USP45Q70EL2 814 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 KIAA0907Q7Z7F0 614 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TTC7BQ86TV6 843 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TSPAN33Q86UF1 283 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SLC22A9Q8IVM8 553 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ADGRG2Q8IZP9 1017 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 STK40Q8N2I9 435 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CHST14Q8NCH0 376 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GRIN3AQ8TCU5 1115 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 WFIKKN2Q8TEU8 576 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 OSCP1Q8WVF1 389 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SORCS1Q8WY21 1168 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PTERQ96BW5 349 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 EID2BQ96D98 161 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CCDC126Q96EE4 140 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 MOCOSQ96EN8 888 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ZNF641Q96N77 438 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 LRRC3BQ96PB8 259 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TMEM237Q96Q45 408 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 GPR21Q99679 349 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 TUBB6Q9BUF5 446 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 PBX4Q9BYU1 374 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CPEB1Q9BZB8 566 aaKnown RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 SHCBP1LQ9BZQ2 653 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 CIPCQ9C0C6 399 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 NMUR2Q9GZQ4 415 aa8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ILKAPQ9H0C8 392 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-206ENST00000588860 ZNF576Q9H609 170 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms