RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 COG7P83436 770 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ITKQ08881 620 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PDCLQ13371 301 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 EIF4EBP2Q13542 120 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ENPP2Q13822 863 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 EXOC3L4Q17RC7 722 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SPDYE7PQ495Y7 208 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 FAM133BQ5BKY9 247 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PMS2CLQ68D20 193 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 NADSYN1Q6IA69 706 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 BEND5Q7L4P6 421 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 TAC4Q86UU9 113 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 DENND1CQ8IV53 801 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 FAM114A1Q8IWE2 563 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ZNF606Q8WXB4 792 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SLC39A13Q96H72 371 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PIWIL1Q96J94 861 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 LMLNQ96KR4 655 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PRICKLE1Q96MT3 831 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 XPO6Q96QU8 1125 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ACOX2Q99424 681 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 GABRG3Q99928 467 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ALOXE3Q9BYJ1 711 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 TPSD1Q9BZJ3 242 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 MANSC1Q9H8J5 431 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 CD93Q9NPY3 652 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ABCC13Q9NSE7 274 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SAMSN1Q9NSI8 373 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SEMA4GQ9NTN9 838 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 MKS1Q9NXB0 559 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PLK2Q9NYY3 685 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 NAALADL1Q9UQQ1 740 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ATP8A1Q9Y2Q0 1164 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PCDHGA5Q9Y5G8 931 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 NOX1Q9Y5S8 564 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 RAD54BQ9Y620 910 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PCDH15Q96QU1 1955 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 CEP192Q8TEP8 1941 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 NYNRINQ9P2P1 1898 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 LAMA1P25391 3075 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 IGHV1OR15-9A0A0B4J2B8 117 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 GOLGA6L7A0A1B0GV03 622 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MED19A0JLT2 244 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 BCLAF3A2AJT9 711 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MARCH11A6NNE9 402 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 KCNJ18B7U540 433 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 FOXN3O00409 490 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 SLC30A4O14863 429 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 IRAK2O43187 625 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MED7O43513 233 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ACSL4O60488 711 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NDUFS2O75306 463 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 KATNA1O75449 491 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ERN1O75460 977 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 RHOBTB1O94844 696 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ERBB2P04626 1255 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ZNF806P0C7X5 589 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 GABRG2P18507 467 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 DDCP20711 480 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 PRKCHP24723 683 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 EEF1GP26641 437 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 HLA-FP30511 346 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NTSR1P30989 418 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 SLC6A4P31645 630 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CDH5P33151 784 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CHKAP35790 457 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MPLP40238 635 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ACADSBP45954 432 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 AVPR1BP47901 424 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 HARS2P49590 506 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 LIMK1P53667 647 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TBX4P57082 545 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 PITX1P78337 314 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MTM1Q13496 603 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 KCNJ12Q14500 433 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 SF3A2Q15428 464 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CCDC6Q16204 474 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TPD52L1Q16890 204 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 PTPN20Q4JDL3 420 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MPPE1Q53F39 396 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 HSP90AA4PQ58FG1 418 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TCP11X2Q5H9J9 407 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 RNF187Q5TA31 235 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 OTUD1Q5VV17 481 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 B3GNTL1Q67FW5 361 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NUGGCQ68CJ6 796 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM215Q68D42 235 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TCEAL6Q6IPX3 200 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 C11orf57Q6ZUT1 292 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 FAM183BPQ6ZVS7 135 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TRMT11Q7Z4G4 463 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ANKS1BQ7Z6G8 1248 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM110Q86TL2 294 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms