RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 UGT1A5P35504 534 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 GMPRP36959 345 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 P2RY2P41231 377 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 PGGT1BP53609 377 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 DCDC1P59894 354 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 IRF9Q00978 393 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CNTN1Q12860 1018 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ZNF460Q14592 562 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 DBN1Q16643 649 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 TXNDC5Q8NBS9 432 aaKnown RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 CKAP2Q8WWK9 683 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CCDC134Q9H6E4 229 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 FBRSQ9HAH7 460 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 NFKBIL1Q9UBC1 381 aaPredicted RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 ACOT9Q9Y305 439 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ATG2BQ96BY7 2078 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 MID1O15344 667 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 OR1I1O60431 355 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CA5AP35218 305 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ADARP55265 1226 aaKnown RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 CDKN2DP55273 166 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 TERF2Q15554 542 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 FBXO43Q4G163 708 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ZNF776Q68DI1 518 aaPredicted RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 KIAA1211LQ6NV74 962 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 KYAT3Q6YP21 454 aaKnown RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 Q6ZVL8 140 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 TECPR1Q7Z6L1 1165 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 RAVER1Q8IY67 606 aaKnown RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 PLD6Q8N2A8 252 aaKnown RBP30.25■■■□□ 2.43
CCM2-219ENST00000544363 CDH19Q9H159 772 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CCDC68Q9H2F9 335 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 FAM83DQ9H4H8 585 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CD84Q9UIB8 345 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 CRLS1Q9UJA2 301 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 A0A087X1B8 175 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 COL6A2P12110 1019 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 HOXB2P14652 356 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 C5AR1P21730 350 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 FDXRP22570 491 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 ACRV1P26436 265 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 ETV3P41162 512 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 LIG3P49916 1009 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 COPAP53621 1224 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 N4BP2L1Q5TBK1 243 aaPredicted RBP30.24■■■□□ 2.43
CCM2-219ENST00000544363 DTX3LQ8TDB6 740 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 BIRC8Q96P09 236 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 WRAP53Q9BUR4 548 aaKnown RBP30.24■■■□□ 2.43
CCM2-219ENST00000544363 DUSP12Q9UNI6 340 aa30.24■■■□□ 2.43
CCM2-219ENST00000544363 DRD3P35462 400 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 RPS14P62263 151 aaKnown RBP30.23■■■□□ 2.43
CCM2-219ENST00000544363 ITGA9Q13797 1035 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 TMEM52BQ4KMG9 183 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 PIP5KL1Q5T9C9 394 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 LCA5Q86VQ0 697 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 C1QTNF1Q9BXJ1 281 aa30.23■■■□□ 2.43
CCM2-219ENST00000544363 A0A1W2PQF6 199 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 PKMP14618 531 aaKnown RBP30.22■■■□□ 2.43
CCM2-219ENST00000544363 CCINQ13939 588 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ACOX1Q15067 660 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ATP13A5Q4VNC0 1218 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 C16orf46Q6P387 395 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 CCDC91Q7Z6B0 441 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 NRSN1Q8IZ57 195 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 NXPE1Q8N323 547 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 AADATQ8N5Z0 425 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ARMC2Q8NEN0 867 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 MAGEB18Q96M61 343 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 COQ10AQ96MF6 247 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 P2RY12Q9H244 342 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ZNF358Q9NW07 568 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 TMEM216Q9P0N5 145 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 EMCNQ9ULC0 261 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 COMMD10Q9Y6G5 202 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 SRRM3A6NNA2 597 aaPredicted RBP30.22■■■□□ 2.43
CCM2-219ENST00000544363 NEMP1O14524 444 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ZNF7P17097 686 aaPredicted RBP30.22■■■□□ 2.43
CCM2-219ENST00000544363 GM2AP17900 193 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 TIAL1Q01085 375 aaKnown RBP eCLIP30.22■■■□□ 2.43
CCM2-219ENST00000544363 RBFAQ8N0V3 343 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 SCAMP4Q969E2 229 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 ULK4Q96C45 1275 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 TSNARE1Q96NA8 513 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 SPATA16Q9BXB7 569 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 PRDM6Q9NQX0 595 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 FADS3Q9Y5Q0 445 aa30.22■■■□□ 2.43
CCM2-219ENST00000544363 MAN2B1O00754 1011 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 PRMT5O14744 637 aaPredicted RBP30.21■■■□□ 2.43
CCM2-219ENST00000544363 ESR1P03372 595 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 MLF2Q15773 248 aaPredicted RBP30.21■■■□□ 2.43
CCM2-219ENST00000544363 CTSL3PQ5NE16 218 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 HENMT1Q5T8I9 393 aaKnown RBP30.21■■■□□ 2.43
CCM2-219ENST00000544363 CACUL1Q86Y37 369 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 CENPLQ8N0S6 344 aaPredicted RBP30.21■■■□□ 2.43
CCM2-219ENST00000544363 MKRN2Q9H000 416 aaKnown RBP30.21■■■□□ 2.43
CCM2-219ENST00000544363 POPDC3Q9HBV1 291 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 GPAMQ9HCL2 828 aa30.21■■■□□ 2.43
CCM2-219ENST00000544363 WNT9AO14904 365 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 PLIN3O60664 434 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 RHOBTB1O94844 696 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms