RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TBCELQ5QJ74 424 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 MRNIPQ6NTE8 343 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 ZBTB49Q6ZSB9 765 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 SYVN1Q86TM6 617 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 FBXO39Q8N4B4 442 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 FAM47BQ8NA70 645 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 OR52B6Q8NGF0 335 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 FAR2Q96K12 515 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 UROC1Q96N76 676 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 RBM38Q9H0Z9 239 aaKnown RBP13.99□□□□□ -0.17
UBE3B-210ENST00000539599 PDFQ9HBH1 243 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 INTS7Q9NVH2 962 aaKnown RBP13.99□□□□□ -0.17
UBE3B-210ENST00000539599 EIF2B4Q9UI10 523 aaKnown RBP13.99□□□□□ -0.17
UBE3B-210ENST00000539599 ANGPT2O15123 496 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 HTRA2O43464 458 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-210ENST00000539599 SNAP91O60641 907 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 SERPINF2P08697 491 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 HTR7P34969 479 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 RPS6KA2Q15349 733 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 MAPRE2Q15555 327 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 SAMD4BQ5PRF9 694 aaKnown RBP13.99□□□□□ -0.17
UBE3B-210ENST00000539599 OFCC1Q8IZS5 231 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 BRSK1Q8TDC3 778 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 EEF1AKMT1Q8WVE0 214 aa13.99□□□□□ -0.17
UBE3B-210ENST00000539599 MANSC4A6NHS7 340 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 MYCP01106 439 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 PRLP01236 227 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SLC6A2P23975 617 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SLC7A1P30825 629 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 PIK3CGP48736 1102 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 APOFQ13790 326 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 TIGD2Q4W5G0 525 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 KANK2Q63ZY3 851 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 CCSAPQ6IQ19 270 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 TRAF7Q6Q0C0 670 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 AHI1Q8N157 1196 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 MIER2Q8N344 545 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 ARHGAP18Q8N392 663 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 CDYL2Q8N8U2 506 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 BCL7CQ8WUZ0 217 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 FUBP1Q96AE4 644 aaKnown RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 FBXL20Q96IG2 436 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 TRIB3Q96RU7 358 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 NACA2Q9H009 215 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 BCAP29Q9UHQ4 241 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 COMMD3-BMI1R4GMX3 469 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 A8MX80 341 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 INPP4BO15327 924 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 KLKB1P03952 638 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SLC5A2P31639 672 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 HTR6P50406 440 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 RBBP7Q16576 425 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 NFE2Q16621 373 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 PYCR3Q53H96 274 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SLC24A5Q71RS6 500 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SAPCD2Q86UD0 394 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 ZNF597Q96LX8 424 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 UPF3AQ9H1J1 476 aaKnown RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 ZNF696Q9H7X3 374 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 TLR8Q9NR97 1041 aaKnown RBP13.98□□□□□ -0.17
UBE3B-210ENST00000539599 OLAHQ9NV23 265 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 SMPD4Q9NXE4 827 aa13.98□□□□□ -0.17
UBE3B-210ENST00000539599 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 F5H5T6 163 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 DLGAP1O14490 977 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 KATNA1O75449 491 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 OR4F21O95013 312 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 FGF1P05230 155 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 IL12AP29459 219 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 ZNF140P52738 457 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 GNA12Q03113 381 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 IRF5Q13568 498 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 TCTN1Q2MV58 587 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 RALGPS2Q86X27 583 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 LRRC49Q8IUZ0 686 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 DGCR14Q96DF8 476 aaKnown RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 BIRC8Q96P09 236 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CCT7Q99832 543 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 GPATCH1Q9BRR8 931 aaKnown RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 MRPS26Q9BYN8 205 aaKnown RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 SMOXQ9NWM0 555 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 MARCH5Q9NX47 278 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 NDUFAF1Q9Y375 327 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 ARPC2O15144 300 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 NDUFS3O75489 264 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 RTN3O95197 1032 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CAPNS1P04632 268 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CTPS1P17812 591 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 PSMD8P48556 350 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 ACVR1Q04771 509 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 PARP15Q460N3 678 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms