RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CABS1Q96KC9 395 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 IL17CQ9P0M4 197 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 A0A1W2PP55 124 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 TCRBV21S2A2A0A5A6 115 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 STX7O15400 261 aaKnown RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 SPINT1O43278 529 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 EDF1O60869 148 aaKnown RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 NEFHP12036 1026 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 HNRNPH1P31943 449 aaKnown RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 PRAMEP78395 509 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 ERAP2Q6P179 960 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 SPATA21Q7Z572 469 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 SPNS2Q8IVW8 549 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 HDDC3Q8N4P3 179 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 MRGPRX1Q96LB2 322 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 HDAC8Q9BY41 377 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 FBRSQ9HAH7 460 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 TMEM216Q9P0N5 145 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 MARCH4Q9P2E8 410 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 PHGDHO43175 533 aaKnown RBP18.4■□□□□ 0.54
SMPD1-208ENST00000533123 DNTTP04053 509 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 C2P06681 752 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 CYP2A6P11509 494 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-208ENST00000533123 VIPR1P32241 457 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 ARHGEF7Q14155 803 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 USP10Q14694 798 aaKnown RBP18.4■□□□□ 0.54
SMPD1-208ENST00000533123 PIP5KL1Q5T9C9 394 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 CES4AQ5XG92 561 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 CNSTQ6PJW8 725 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 C6orf89Q6UWU4 347 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 OTOAQ7RTW8 1153 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 CCDC63Q8NA47 563 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 PBXIP1Q96AQ6 731 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 NLE1Q9NVX2 485 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-208ENST00000533123 DCDC2Q9UHG0 476 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 PKP3Q9Y446 797 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 TTC28Q96AY4 2481 aa18.4■□□□□ 0.54
SMPD1-208ENST00000533123 CHURC1-FNTBB4DL54 471 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 SLC7A4O43246 635 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 RNASEH2AO75792 299 aaKnown RBP18.39■□□□□ 0.54
SMPD1-208ENST00000533123 NFKBIAP25963 317 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 MMP12P39900 470 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 ACVR1Q04771 509 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 RALGDSQ12967 914 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF460Q14592 562 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 NUMA1Q14980 2115 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 KYAT3Q6YP21 454 aaKnown RBP18.39■□□□□ 0.54
SMPD1-208ENST00000533123 CNPY4Q8N129 248 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 PJA1Q8NG27 643 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 GANCQ8TET4 914 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 PEX13Q92968 403 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 SIPA1Q96FS4 1042 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 CDKN2AIPNLQ96HQ2 116 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 OMDQ99983 421 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 WRAP53Q9BUR4 548 aaKnown RBP18.39■□□□□ 0.54
SMPD1-208ENST00000533123 MFSD1Q9H3U5 465 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 FBXL12Q9NXK8 326 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 FKBPLQ9UIM3 349 aa18.39■□□□□ 0.54
SMPD1-208ENST00000533123 FAM95CA0A1B0GW59 222 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 CCDC162PA2VCL2 907 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 AREL1O15033 823 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 PLIN3O60664 434 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 RPP40O75818 363 aaKnown RBP18.39■□□□□ 0.53
SMPD1-208ENST00000533123 NDUFV2P19404 249 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 CD151P48509 253 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 CSRP3P50461 194 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 RBM20Q5T481 1227 aaKnown RBP18.39■□□□□ 0.53
SMPD1-208ENST00000533123 AGBL4Q5VU57 503 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 DPPA4Q7L190 304 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 SYT13Q7L8C5 426 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
SMPD1-208ENST00000533123 CILP2Q8IUL8 1156 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 CEP97Q8IW35 865 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 GPATCH11Q8N954 259 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 NDNQ99608 321 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 RIMKLBQ9ULI2 386 aa18.39■□□□□ 0.53
SMPD1-208ENST00000533123 NEMP1O14524 444 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 GOT2P00505 430 aaKnown RBP18.38■□□□□ 0.53
SMPD1-208ENST00000533123 MPOP05164 745 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 BPGMP07738 259 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 OVGP1Q12889 678 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 RFLNAQ6ZTI6 216 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 RAPH1Q70E73 1250 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 CLEC14AQ86T13 490 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMPD1-208ENST00000533123 CALML6Q8TD86 181 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 HMGB4Q8WW32 186 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 PROCP04070 461 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 C1SP09871 688 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 SLC35E2BP0CK96 405 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 GABRG2P18507 467 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 ELP6Q0PNE2 266 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 CHI3L2Q15782 390 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 KIAA1324Q6UXG2 1013 aaKnown RBP18.38■□□□□ 0.53
SMPD1-208ENST00000533123 HSD11B1LQ7Z5J1 315 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 NUDCD3Q8IVD9 361 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
SMPD1-208ENST00000533123 ELMO2Q96JJ3 720 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms