RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 TRMOQ9BU70 441 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MRPL1Q9BYD6 325 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 EBF3Q9H4W6 596 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ALG9Q9H6U8 611 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 POLMQ9NP87 494 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 IL37Q9NZH6 218 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MARCH4Q9P2E8 410 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 ABT1Q9ULW3 272 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 CRYL1Q9Y2S2 319 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 KCTD3Q9Y597 815 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FRMPD3Q5JV73 1810 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 LOC285095A0A1B0GVY8 99 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 DRGXA6NNA5 263 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 F5H5T6 163 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 J3QL48 77 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 J3QW42 95 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 UBDO15205 165 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 TBX1O43435 398 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 LDB2O43679 373 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 TLR5O60602 858 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PRAMEF11O60813 436 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SMIM24O75264 130 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RFPL3O75679 317 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SUPT7LO94864 414 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 LYNP07948 512 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SERPINF2P08697 491 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 EPB42P16452 691 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 HOXB8P17481 243 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 XRCC1P18887 633 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 ME2P23368 584 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ACVRL1P37023 503 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PEX19P40855 299 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SLC26A3P40879 764 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 TM4SF4P48230 202 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RPIAP49247 311 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 KPNA1P52294 538 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 CDKN2DP55273 166 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FAM189BP81408 668 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MRPS22P82650 360 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 RING1Q06587 406 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 TNK2Q07912 1038 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MED21Q13503 144 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RFTN1Q14699 578 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MMEL1Q495T6 779 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SFT2D3Q587I9 215 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RPS27LQ71UM5 84 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 PIM3Q86V86 326 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SPNS2Q8IVW8 549 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PQLC1Q8N2U9 271 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RYBPQ8N488 228 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 RNF148Q8N7C7 305 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ICA1LQ8NDH6 482 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 EXT2Q93063 718 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FEM1CQ96JP0 617 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 DNAJC1Q96KC8 554 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 TBATAQ96M53 351 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 NPAS2Q99743 824 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 NACA2Q9H009 215 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SUDS3Q9H7L9 328 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 TMEM161AQ9NX61 479 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ZDHHC7Q9NXF8 308 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 C6orf203Q9P0P8 240 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 PDP2Q9P2J9 529 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SUCOQ9UBS9 1254 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 VPS28Q9UK41 221 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PSMD13Q9UNM6 376 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 VWA8A3KMH1 1905 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 CASP8AP2Q9UKL3 1982 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 MTMR11A4FU01 709 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 H3BNX3 289 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 TXNDC9O14530 226 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 CASQ2O14958 399 aaPredicted RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 CD3EAPO15446 510 aaKnown RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 GPR39O43194 453 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 GOT2P00505 430 aaKnown RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 IGLV3-27P01718 113 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 ZCCHC18P0CG32 403 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 IMPDH1P20839 514 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 TACR2P21452 398 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 MSX2P35548 267 aaPredicted RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 AQP4P55087 323 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 GALNT1Q10472 559 aaPredicted RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 STX5Q13190 355 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 MTA1Q13330 715 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 PTK2BQ14289 1009 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 GALNT3Q14435 633 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 SQLEQ14534 574 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 IHHQ14623 411 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 RARS2Q5T160 578 aaKnown RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 OR52E8Q6IFG1 317 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 ERAP2Q6P179 960 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 ZFP1Q6P2D0 407 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 LGI2Q8N0V4 545 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 PELI3Q8N2H9 469 aa7.48□□□□□ -1.21
CAST-228ENST00000509903 C19orf47Q8N9M1 422 aaKnown RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 BHLHE22Q8NFJ8 381 aaPredicted RBP7.48□□□□□ -1.21
CAST-228ENST00000509903 OR52K2Q8NGK3 314 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms