RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ARF5P84085 180 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 CDK17Q00537 523 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 PDE1BQ01064 536 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 HHEXQ03014 270 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 RAD51Q06609 339 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 PPP3CAQ08209 521 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 FOXD4Q12950 439 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 MYLK3Q32MK0 819 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ALFQ53S48 1182 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 HGSNATQ68CP4 663 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ERAP2Q6P179 960 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ZNF761Q86XN6 746 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 DMRTC2Q8IXT2 367 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 GUF1Q8N442 669 aaKnown RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 SFRP1Q8N474 314 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ARFGAP1Q8N6T3 406 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 OR7D4Q8NG98 312 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 GRHL3Q8TE85 626 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 SLC37A2Q8TED4 501 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 ARHGEF2Q92974 986 aaKnown RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 NINJ1Q92982 152 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 VOPP1Q96AW1 172 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 HMCESQ96FZ2 354 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 RUFY1Q96T51 708 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 SPON2Q9BUD6 331 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 CUEDC2Q9H467 287 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 FBXO2Q9UK22 296 aaPredicted RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 FARSAQ9Y285 508 aaKnown RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 SRPRBQ9Y5M8 271 aaKnown RBP7.82□□□□□ -1.16
LINC01961-201ENST00000449954 MYO7BQ6PIF6 2116 aa7.82□□□□□ -1.16
LINC01961-201ENST00000449954 PRRC2AP48634 2157 aaKnown RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 PAGE1O75459 146 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 C9P02748 559 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 NR3C1P04150 777 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 PAEPP09466 180 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 KRT13P13646 458 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 GTF2H1P32780 548 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 ADRA1BP35368 520 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 MMP12P39900 470 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 TSFMP43897 325 aaKnown RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 GNPDA1P46926 289 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 RPL34P49207 117 aaKnown RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 LIG3P49916 1009 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 RAC1P63000 192 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 RAPSNQ13702 412 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 LLGL1Q15334 1064 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 CNGA2Q16280 664 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 KYNUQ16719 465 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 ANO6Q4KMQ2 910 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 IZUMO3Q5VZ72 239 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 B3GNTL1Q67FW5 361 aaPredicted RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 KRT39Q6A163 491 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 FAM180AQ6UWF9 173 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 LRRC31Q6UY01 552 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 UNC13DQ70J99 1090 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 BRAPQ7Z569 592 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 TFAP2DQ7Z6R9 452 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 CBARPQ8N350 705 aaPredicted RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 LRRN4CLQ8ND94 238 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 FBXL13Q8NEE6 735 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 HCAR2Q8TDS4 363 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 MTFMTQ96DP5 389 aaKnown RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 RNF31Q96EP0 1072 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 ELMO2Q96JJ3 720 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 C9orf72Q96LT7 481 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 GDAP1L1Q96MZ0 367 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 MED15Q96RN5 788 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 WDR77Q9BQA1 342 aaPredicted RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 LGR4Q9BXB1 951 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 SUDS3Q9H7L9 328 aaPredicted RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 SARS2Q9NP81 518 aaKnown RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 PHPT1Q9NRX4 125 aaPredicted RBP7.81□□□□□ -1.16
LINC01961-201ENST00000449954 SNX7Q9UNH6 387 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
LINC01961-201ENST00000449954 SYNJ2BP-COX16A0A087WUM0 186 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 A0A0U1RQS6 177 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 LILRA5A6NI73 299 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 DRGXA6NNA5 263 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 PDXKO00764 312 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 JRKO75564 520 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 RECQL5O94762 991 aaPredicted RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 IGHEP01854 428 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 CEACAM5P06731 702 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 ITIH2P19823 946 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 DNAJA1P31689 397 aaKnown RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 PBX1P40424 430 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 MXI1P50539 228 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 IST1P53990 364 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 PITX1P78337 314 aaPredicted RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 OTUD4Q01804 1114 aaKnown RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 GNA12Q03113 381 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 CUL2Q13617 745 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms