RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RSL1D1O76021 490 aaKnown RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 C2orf80Q0P641 193 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 RASGRP3Q8IV61 690 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 IL31RAQ8NI17 732 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 IKZF2Q9UKS7 526 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 FPGTO14772 594 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF208O43345 1280 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PIAS1O75925 651 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 AVPR1BP47901 424 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 AIF1P55008 147 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ILF3Q12906 894 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 GRIK5Q16478 980 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 FCRL4Q96PJ5 515 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ING3Q9NXR8 418 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 AZIN1O14977 448 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 AQP1P29972 269 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PGDP52209 483 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 USP4Q13107 963 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 NT5DC1Q5TFE4 455 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 POTEHQ6S545 545 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 HAS1Q92839 578 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SNX15Q9NRS6 342 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PCDHB1Q9Y5F3 818 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 OR1F1O43749 312 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 DUSP11O75319 330 aaKnown RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SLC22A3O75751 556 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 TSEN15Q8WW01 171 aaKnown RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 KLK6Q92876 244 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 MTRRQ9UBK8 725 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PLOD3O60568 738 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PLGP00747 810 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 STARP49675 285 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PARP8Q8N3A8 854 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 HDAC7Q8WUI4 952 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 VWA7Q9Y334 891 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SLC35G6P0C7Q6 338 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 CHST15Q7LFX5 561 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 NPAS4Q8IUM7 802 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 XAGE5Q8WWM1 108 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 TMEM27Q9HBJ8 222 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 CRNNQ9UBG3 495 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 FBXW2Q9UKT8 454 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 C5orf60A6NFR6 353 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 RPP40O75818 363 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 DDX6P26196 483 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ZBTB6Q15916 424 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 EXOSC8Q96B26 276 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 OMA1Q96E52 524 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 RNF31Q96EP0 1072 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 MBD2Q9UBB5 411 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 HBS1LQ9Y450 684 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 MAP4K5Q9Y4K4 846 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 MYH13Q9UKX3 1938 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PSIP1O75475 530 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 INHAP05111 366 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ACRP10323 421 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 RAB25P57735 213 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PIK3R6Q5UE93 754 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 STX12Q86Y82 276 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ZBTB2Q8N680 514 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 TLR10Q9BXR5 811 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 TRMT13Q9NUP7 481 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 EGFL7Q9UHF1 273 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PGRMC2O15173 223 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 LAMP2P13473 410 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ALDH4A1P30038 563 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 BLKP51451 505 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 DGKEP52429 567 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PIWIL4Q7Z3Z4 852 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PMM1Q92871 262 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ADGRE2Q9UHX3 823 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 CDH7Q9ULB5 785 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 RGS20O76081 388 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 COX4I1P13073 169 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PPIBP23284 216 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ADGRG6Q86SQ4 1221 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PHF13Q86YI8 300 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 RDH11Q8TC12 318 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 SRMSQ9H3Y6 488 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 CCDC177Q9NQR7 707 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 TRAFD1O14545 582 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ENPP3O14638 875 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms