RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 FOXN2P32314 431 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 CDKN1CP49918 316 aaPredicted RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 PRAMEP78395 509 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 SMAD1Q15797 465 aaKnown RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 SPANXN3Q5MJ09 141 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 PDPK2PQ6A1A2 396 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 WDR93Q6P2C0 686 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 LAYNQ6UX15 382 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 ADAMTSL4Q6UY14 1074 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 KYAT3Q6YP21 454 aaKnown RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 HEATR4Q86WZ0 1026 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 UNC5BQ8IZJ1 945 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 GPR161Q8N6U8 529 aaKnown RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 OR4L1Q8NH43 312 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 FUBP1Q96AE4 644 aaKnown RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 APOOQ9BUR5 198 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 LGR4Q9BXB1 951 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 TEX101Q9BY14 249 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 PARD6BQ9BYG5 372 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 TSPYL1Q9H0U9 437 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 ASB8Q9H765 288 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 IL1RAPL1Q9NZN1 696 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 SMG5Q9UPR3 1016 aaKnown RBP18.67■□□□□ 0.58
SMN2-202ENST00000380742 SLC30A1Q9Y6M5 507 aa18.67■□□□□ 0.58
SMN2-202ENST00000380742 A6NNZ2 444 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 AGAP14A8MT82 685 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 INPP4BO15327 924 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 PYGLP06737 847 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 PAMP19021 973 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 CDK3Q00526 305 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 NFATC2Q13469 925 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 ITGA9Q13797 1035 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 ZRANB3Q5FWF4 1079 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 TPRG1LQ5T0D9 272 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 PSAPL1Q6NUJ1 521 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 AFTPHQ6ULP2 937 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 Q6ZSR6 202 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 SNX20Q7Z614 316 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 PTAR1Q7Z6K3 402 aaPredicted RBP18.66■□□□□ 0.58
SMN2-202ENST00000380742 RELL1Q8IUW5 271 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 SYT12Q8IV01 421 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 PNPLA1Q8N8W4 532 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 MFSD2AQ8NA29 543 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 SUMF1Q8NBK3 374 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMN2-202ENST00000380742 OR13H1Q8NG92 308 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 LOXL4Q96JB6 756 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 VPS35Q96QK1 796 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 RAB23Q9ULC3 237 aa18.66■□□□□ 0.58
SMN2-202ENST00000380742 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.66■□□□□ 0.58
SMN2-202ENST00000380742 A0A1B0GTW7 788 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 GOLGA8KD6RF30 607 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 GOLGA8TH3BQL2 631 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 EPN2O95208 641 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 THEGLP0DJG4 465 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 ITGALP20701 1170 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 SSTR1P30872 391 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 NBL1P41271 181 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 CSNK1EP49674 416 aaKnown RBP18.65■□□□□ 0.58
SMN2-202ENST00000380742 GPX6P59796 221 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 YPEL5P62699 121 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 CACNG1Q06432 222 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 LONRF1Q17RB8 773 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 UBAP2Q5T6F2 1119 aaKnown RBP18.65■□□□□ 0.58
SMN2-202ENST00000380742 CAPN12Q6ZSI9 719 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 CEP128Q6ZU80 1094 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 TRIM74Q86UV6 250 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 PALM2Q8IXS6 379 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 PIANPQ8IYJ0 282 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 SLC22A18ASQ8N1D0 253 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 BTN2A2Q8WVV5 523 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 GLYATL1Q969I3 302 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 KLHDC7BQ96G42 594 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 SGSM3Q96HU1 749 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 COX14Q96I36 57 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 HIC2Q96JB3 615 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 SEMA4AQ9H3S1 761 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 WDR26Q9H7D7 661 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 LRRC4CQ9HCJ2 640 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 ARFGAP3Q9NP61 516 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 GPR27Q9NS67 375 aa18.65■□□□□ 0.58
SMN2-202ENST00000380742 MARCH4Q9P2E8 410 aaPredicted RBP18.65■□□□□ 0.58
SMN2-202ENST00000380742 TRBV5-4A0A0C4DH59 114 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 GNSP15586 552 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 RABIFP47224 123 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 AFF3P51826 1226 aaKnown RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 SEMA3AQ14563 771 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 KYNUQ16719 465 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 GPR33Q49SQ1 333 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 LAIR1Q6GTX8 287 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 TRMT10BQ6PF06 316 aaKnown RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 FAM174AQ8TBP5 190 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.64■□□□□ 0.57
SMN2-202ENST00000380742 CDC42EP4Q9H3Q1 356 aaKnown RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 PHPT1Q9NRX4 125 aaPredicted RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 CATSPERZQ9NTU4 200 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 C20orf96Q9NUD7 363 aaPredicted RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 SMOXQ9NWM0 555 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 NINJ2Q9NZG7 142 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 SUSD2Q9UGT4 822 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms