RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 AZIN2Q96A70 460 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 TADA1Q96BN2 335 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ZNF669Q96BR6 464 aaPredicted RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 PLD4Q96BZ4 506 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 TRMT2BQ96GJ1 504 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 MYRFLQ96LU7 910 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 AGAP3Q96P47 875 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ACOX2Q99424 681 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 SEMA3CQ99985 751 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 PAIP2Q9BPZ3 127 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 TBL1YQ9BQ87 522 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 TRIM56Q9BRZ2 755 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 MCMBPQ9BTE3 642 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 DPH1Q9BZG8 443 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 IQCGQ9H095 443 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 ARNT2Q9HBZ2 717 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 KLHL14Q9P2G3 628 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 SLC17A7Q9P2U7 560 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 IPO11Q9UI26 975 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 PHTF1Q9UMS5 762 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 RPS6KL1Q9Y6S9 549 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 A0A1W2PNU3 283 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 SLC12A8A0AV02 714 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 F5H423 210 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 GOLGA8RI6L899 631 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 TIMM44O43615 452 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 TLR5O60602 858 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 UGT1A9O60656 530 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SIN3BO75182 1162 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 GLRA3O75311 464 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 LATS1O95835 1130 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 HLA-DQB2P05538 268 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 ITGA2BP08514 1039 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 TROVE2P10155 538 aaKnown RBP eCLIP8.23□□□□□ -1.09
CD44-205ENST00000352818 TACR2P21452 398 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 COL8A1P27658 744 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SPRP35270 261 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 SKIV2L2P42285 1042 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 PPP3CCP48454 512 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SERPINB4P48594 390 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 POLD2P49005 469 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 LIMK2P53671 638 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 CRADDP78560 199 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 ILF2Q12905 390 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 BMPR2Q13873 1038 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SHBQ15464 509 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 GALNTL6Q49A17 601 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 PCID2Q5JVF3 399 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 C10orf120Q5SQS8 335 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 FAM182AQ5T1J6 154 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 DENND5AQ6IQ26 1287 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 FBXL22Q6P050 247 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 KDELC1Q6UW63 502 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 CDHR3Q6ZTQ4 885 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 LCA5Q86VQ0 697 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 GATAD2AQ86YP4 633 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 CNTN4Q8IWV2 1026 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 C10orf82Q8WW14 230 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 IMP4Q96G21 291 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 TOE1Q96GM8 510 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 CNDP2Q96KP4 475 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 MRGPRX1Q96LB2 322 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 C7orf26Q96N11 449 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 ZNF599Q96NL3 588 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 FAM111AQ96PZ2 611 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 KLF6Q99612 283 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 RBBP8Q99708 897 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SLC25A51Q9H1U9 297 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 MANSC1Q9H8J5 431 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 UGT1A7Q9HAW7 530 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 UGT1A10Q9HAW8 530 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 UGT1A8Q9HAW9 530 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 ATP13A1Q9HD20 1204 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 NDFIP2Q9NV92 336 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 WSB2Q9NYS7 404 aaPredicted RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 MPP6Q9NZW5 540 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 SIRPGQ9P1W8 387 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 EIF2B4Q9UI10 523 aaKnown RBP8.23□□□□□ -1.09
CD44-205ENST00000352818 ZMYM5Q9UJ78 669 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 NUDT5Q9UKK9 219 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 CLCA2Q9UQC9 943 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 TCAF1Q9Y4C2 921 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 USH1CQ9Y6N9 552 aa8.23□□□□□ -1.09
CD44-205ENST00000352818 OBSL1O75147 1896 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 METTL12A8MUP2 240 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 MEI4A8MW99 385 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 F5H5T6 163 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ACSL4O60488 711 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 RAMP2O60895 175 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 NDUFS2O75306 463 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 USP12O75317 370 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 DCTN3O75935 186 aa8.22□□□□□ -1.09
CD44-205ENST00000352818 ALDOAP04075 364 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms